ggKbase home page

PLM4_32_b1_sep16_scaffold_2830

Search features with annotation key words

Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_32_b1_sep16_scaffold_2830_1
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

2..1084
DNA (1083bp) protein (361aa)
Oxidoreductase, molybdopterin-binding protein bin=GWA2_Methylomirabilis_73_35 species=alpha proteobacterium BAL199 genus=unknown taxon_order=unknown taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
oxidoreductase, molybdopterin-binding protein
Tax=GWA2_Rokubacteria_73_35_curated
PLM4_32_b1_sep16_scaffold_2830_2
unknown

Not on your lists

comp(1179..1289)
DNA (111bp) protein (37aa)

This feature has no annotations

PLM4_32_b1_sep16_scaffold_2830_3
unknown

Not on your lists

comp(1581..2051)
DNA (471bp) protein (157aa)

This feature has no annotations

PLM4_32_b1_sep16_scaffold_2830_4
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(2111..2962)
DNA (852bp) protein (284aa)
hypothetical protein Tax=Elioraea tepidiphila RepID=UPI00036286A9
binding-protein-dependent transport systems inner membrane component
Tax=GWA2_Rokubacteria_70_23_curated
PLM4_32_b1_sep16_scaffold_2830_5
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(2955..3899)
DNA (945bp) protein (315aa)
Binding-protein-dependent transport systems inner membrane component Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C4Z6_SPHTD
binding-protein-dependent transport system inner membrane protein
Tax=GWA2_Rokubacteria_70_23_curated
PLM4_32_b1_sep16_scaffold_2830_6
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(3913..5478)
DNA (1566bp) protein (522aa)
ABC transporter substrate binding protein (Dipeptide) bin=GWF2_Methylomirabilis_70_14 species=Agrobacterium vitis genus=Agrobacterium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
putative ABC transporter periplasmic binding protein A
Tax=GWA2_Rokubacteria_70_23_curated
PLM4_32_b1_sep16_scaffold_2830_7
Mesorhizobium sp. LSHC420B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5589..6056
DNA (468bp) protein (156aa)
hypothetical protein Tax=Candidatus Poribacteria sp. WGA-4E RepID=UPI000378AC2A
Uncharacterized protein {ECO:0000313|EMBL:ESX83380.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSHC420B00.;"
glyoxalase/bleomycin resistance protein/dioxygenase
PLM4_32_b1_sep16_scaffold_2830_8
Caldatribacterium californiense, Caldatribacterium, Atribacteria, Bacteria

Not on your lists

6053..6820
DNA (768bp) protein (256aa)
2-deoxy-D-gluconate 3-dehydrogenase (EC:1.1.1.125)
hypothetical protein Tax=candidate division OP9 bacterium OP9-cSCG RepID=UPI00037918EA
Tax=Caldatribacterium californiense
PLM4_32_b1_sep16_scaffold_2830_9
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(6891..7628)
DNA (738bp) protein (246aa)
ABC transporter-like protein bin=GWC2_Methylomirabilis_70_16 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
ABC transporter-like protein
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM4_32_b1_sep16_scaffold_2830_10
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(7672..8562)
DNA (891bp) protein (297aa)
Membrane lipoprotein lipid attachment site bin=GWC2_Methylomirabilis_70_16 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
ABC transporter substrate-binding protein
Tax=GWC2_Rokubacteria_70_16_curated
PLM4_32_b1_sep16_scaffold_2830_11
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(8576..9343)
DNA (768bp) protein (256aa)
Abc transporter permease protein bin=GWC2_Methylomirabilis_70_16 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
nitrate ABC transporter permease
Tax=GWC2_Rokubacteria_70_16_curated
PLM4_32_b1_sep16_scaffold_2830_12
GWB2_Bacteroidetes_41_8_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

9411..10601
DNA (1191bp) protein (397aa)
oxidoreductase Tax=Spirosoma luteum RepID=UPI0003654D42
oxidoreductase
Tax=GWB2_Bacteroidetes_41_8_curated
Displaying 12 items

View Taxonomy