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PLM4_32_b1_sep16_scaffold_9629

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_32_b1_sep16_scaffold_9629_1
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

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comp(1..1326)
DNA (1326bp) protein (442aa)
Gamma-glutamyltranspeptidase family protein 3 bin=GWC2_Methylomirabilis_70_16 species=Achromobacter xylosoxidans genus=Achromobacter taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
gamma-glutamyltranspeptidase
Tax=GWC2_Rokubacteria_70_16_curated
PLM4_32_b1_sep16_scaffold_9629_2
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

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1350..2075
DNA (726bp) protein (242aa)
Probable glutamine amidotransferase bin=GWC2_Methylomirabilis_70_16 species=Thermomicrobium roseum genus=Thermomicrobium taxon_order=Thermomicrobiales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
peptidase C26 family protein
Tax=GWC2_Rokubacteria_70_16_curated
PLM4_32_b1_sep16_scaffold_9629_3
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

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3018..3425
DNA (408bp) protein (136aa)
Putative uncharacterized protein bin=GWC2_Methylomirabilis_70_16 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
hypothetical protein
Tax=GWC2_Rokubacteria_70_16_curated
PLM4_32_b1_sep16_scaffold_9629_4
Methylobacterium nodulans, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3436..4368)
DNA (933bp) protein (311aa)
Metallophosphoesterase Tax=Methylobacterium nodulans (strain ORS2060 / LMG 21967) RepID=B8IFA3_METNO
metallophosphoesterase
Metallophosphoesterase {ECO:0000313|EMBL:ACL55814.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium nodulans (strain ORS2060 / LMG 21967).;"
PLM4_32_b1_sep16_scaffold_9629_5
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

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comp(4365..4514)
DNA (150bp) protein (50aa)
PREDICTED: plastocyanin, chloroplastic-like Tax=Pantholops hodgsonii RepID=UPI0003C19BEA
plastocyanin like protein
Plastocyanin like protein {ECO:0000313|EMBL:ABF43690.1}; species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versatilis (strain Ellin345).;"
PLM4_32_b1_sep16_scaffold_9629_6
R_NC10_66_22, NC10, Bacteria

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4675..5241
DNA (567bp) protein (189aa)
RNA polymerase sigma factor Tax=Propionibacterium freudenreichii subsp. shermanii (strain ATCC 9614 / CIP 103027 / CIRM-BIA1) RepID=D7GDD3_PROFC
rpoE; RNA polymerase sigma-70 factor, sigma-E factor
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
PLM4_32_b1_sep16_scaffold_9629_7
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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5238..6026
DNA (789bp) protein (263aa)
Putative transmembrane anti-sigma factor Tax=Pseudomonas sp. M47T1 RepID=I4N1U8_9PSED
membrane protein
Membrane protein {ECO:0000313|EMBL:AHX12427.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;"
PLM4_32_b1_sep16_scaffold_9629_8
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

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comp(5954..7594)
DNA (1641bp) protein (547aa)
Uncharacterized protein bin=GWC2_Methylomirabilis_70_16 species=Gemmatimonas aurantiaca genus=Gemmatimonas taxon_order=Gemmatimonadales taxon_class=Gemmatimonadetes phylum=Gemmatimonadetes tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
hypothetical protein
Tax=GWC2_Rokubacteria_70_16_curated
PLM4_32_b1_sep16_scaffold_9629_9
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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comp(7618..8208)
DNA (591bp) protein (197aa)
Metallo-beta-lactamase superfamily protein bin=GWF2_Methylomirabilis_70_14 species=uncultured bacterium CSL144 genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
beta-lactamase domain-containing protein
Tax=GWA2_Rokubacteria_70_23_curated
PLM4_32_b1_sep16_scaffold_9629_10
RBG_19FT_COMBO_Deltaproteobacteria_52_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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8451..9446
DNA (996bp) protein (332aa)
Putative periplasmic substrate-binding transport protein Tax=Labrenzia aggregata IAM 12614 RepID=A0NZC6_9RHOB
TRAP dicarboxylate transporter subunit DctP
Tax=RBG_19FT_COMBO_Deltaproteobacteria_52_11_curated
PLM4_32_b1_sep16_scaffold_9629_11
RBG_19FT_COMBO_Deltaproteobacteria_52_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9448..9885
DNA (438bp) protein (146aa)
TRAP dicarboxylate family transporter subunit DctQ Tax=Nitratireductor pacificus pht-3B RepID=K2MI92_9RHIZ
TRAP dicarboxylate transporter subunit DctM
Tax=RBG_19FT_COMBO_Deltaproteobacteria_52_11_curated
PLM4_32_b1_sep16_scaffold_9629_12
RBG_16_Deltaproteobacteria_47_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9882..10979
DNA (1098bp) protein (366aa)
TRAP-type C4-dicarboxylate transport system, large permease component bin=GWC2_Methylomirabilis_70_16 species=unknown genus=Bordetella taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
C4-dicarboxylate transport system permease large protein
Tax=RBG_16_Deltaproteobacteria_47_11_curated
Displaying 12 items

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