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PLM4_32_b1_sep16_scaffold_5974

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_32_b1_sep16_scaffold_5974_1
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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comp(2..529)
DNA (528bp) protein (176aa)
Oxidoreductase domain protein bin=GWC2_Methylomirabilis_70_16 species=Pedosphaera parvula genus=Pedosphaera taxon_order=Verrucomicrobiales taxon_class=Verrucomicrobiae phylum=Verrucomicrobia tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
oxidoreductase-like protein
Tax=GWA2_Rokubacteria_70_23_curated
PLM4_32_b1_sep16_scaffold_5974_2
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

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comp(526..1347)
DNA (822bp) protein (274aa)
Glycosyl transferase family 2 bin=GWC2_Methylomirabilis_70_16 species=Pedosphaera parvula genus=Pedosphaera taxon_order=Verrucomicrobiales taxon_class=Verrucomicrobiae phylum=Verrucomicrobia tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
family 2 glycosyl transferase
Tax=GWC2_Rokubacteria_70_16_curated
PLM4_32_b1_sep16_scaffold_5974_3
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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comp(1302..1895)
DNA (594bp) protein (198aa)
ubiX; 3-polyprenyl-4-hydroxybenzoate carboxy-lyase UbiX (EC:4.1.1.-)
3-octaprenyl-4-hydroxybenzoate carboxy-lyase bin=GWC2_Methylomirabilis_70_16 species=unknown genus=Edwardsiella taxon_order=Enterobacteriales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Tax=GWA2_Rokubacteria_70_23_curated
PLM4_32_b1_sep16_scaffold_5974_4
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

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comp(1892..2176)
DNA (285bp) protein (95aa)
Putative uncharacterized protein bin=GWC2_Methylomirabilis_70_16 species=Hydrogenobacter thermophilus genus=Hydrogenobacter taxon_order=Aquificales taxon_class=Aquificae phylum=Aquificae tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
hypothetical protein
Tax=GWC2_Rokubacteria_70_16_curated
PLM4_32_b1_sep16_scaffold_5974_5
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

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comp(2182..2430)
DNA (249bp) protein (83aa)
Putative uncharacterized protein bin=GWC2_Methylomirabilis_70_16 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Tax=GWC2_Rokubacteria_70_16_curated
PLM4_32_b1_sep16_scaffold_5974_6
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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comp(2522..4048)
DNA (1527bp) protein (509aa)
divJ; histidine protein kinase DivJ (EC:2.7.3.-)
Multi-sensor signal transduction histidine kinase bin=GWC2_Methylomirabilis_70_16 species=Geobacter sp. genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Tax=GWA2_Rokubacteria_70_23_curated
PLM4_32_b1_sep16_scaffold_5974_7
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(4045..5475)
DNA (1431bp) protein (477aa)
id=4140115 bin=GWC2_Methylomirabilis_70_24 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
metal dependent phosphohydrolase
Tax=GWA2_Rokubacteria_70_23_curated
PLM4_32_b1_sep16_scaffold_5974_8
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

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comp(5460..5846)
DNA (387bp) protein (129aa)
response regulator with CheY-like receiver domain and winged-helix DNA-binding domain bin=bin7_NC10_sister species=Desulfosporosinus meridiei genus=Desulfosporosinus taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=bin7_NC10_sister organism_group=NC10
putative response regulator receiver domain protein
Tax=CSP1_6_Rokubacteria
PLM4_32_b1_sep16_scaffold_5974_9
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

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comp(5984..6397)
DNA (414bp) protein (138aa)
atpC; ATP synthase subunit epsilon, membrane-bound, F1 sector (EC:3.6.3.14)
ATP synthase epsilon chain bin=GWC2_Methylomirabilis_70_24 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
Tax=GWC2_Rokubacteria_70_16_curated
PLM4_32_b1_sep16_scaffold_5974_10
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(6397..7752)
DNA (1356bp) protein (452aa)
atpD; ATP synthase subunit beta, membrane-bound, F1 sector (EC:3.6.3.14)
ATP synthase subunit beta bin=GWC2_Methylomirabilis_70_16 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Tax=GWC2_Rokubacteria_70_16_curated
PLM4_32_b1_sep16_scaffold_5974_11
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

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comp(7924..8040)
DNA (117bp) protein (39aa)
atpG; ATP synthase subunit gamma, membrane-bound, F1 sector (EC:3.6.3.14)
ATP synthase gamma chain bin=GWC2_Methylomirabilis_70_16 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Tax=GWC2_Rokubacteria_70_16_curated
Displaying 11 items

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