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PLM4_32_b1_sep16_scaffold_544

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Displaying items 1-30 of 33 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_32_b1_sep16_scaffold_544_1
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

2..679
DNA (678bp) protein (226aa)
dienelactone hydrolase-like enzyme (EC:3.1.1.45)
Dienelactone hydrolase-like enzyme bin=GWC2_Methylomirabilis_70_24 species=Candidatus Chloracidobacterium thermophilum genus=Candidatus Chloracidobacterium taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
Tax=GWA2_Rokubacteria_70_23_curated
PLM4_32_b1_sep16_scaffold_544_2
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists


comp(801..1295)
DNA (495bp) protein (165aa)
50S ribosomal protein L17 bin=GWC2_Methylomirabilis_70_16 species=Geobacter metallireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
rplQ; 50S ribosomal protein L17
Tax=GWC2_Rokubacteria_70_16_curated
PLM4_32_b1_sep16_scaffold_544_3
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(1292..2278)
DNA (987bp) protein (329aa)
rpoA; DNA-directed RNA polymerase subunit alpha (EC:2.7.7.6)
DNA-directed RNA polymerase subunit alpha bin=GWC2_Methylomirabilis_70_16 species=Candidatus Solibacter usitatus genus=Candidatus Solibacter taxon_order=Solibacterales taxon_class=Solibacteres phylum=Acidobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Tax=GWC2_Rokubacteria_70_16_curated
PLM4_32_b1_sep16_scaffold_544_4
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists


comp(2307..2930)
DNA (624bp) protein (208aa)
30S ribosomal protein S4 bin=GWF2_Methylomirabilis_70_14 species=Thermacetogenium phaeum genus=Thermacetogenium taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
rpsD; 30S ribosomal protein S4
Tax=GWC2_Rokubacteria_70_16_curated
PLM4_32_b1_sep16_scaffold_544_5
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists


comp(2943..3371)
DNA (429bp) protein (143aa)
Ribosomal protein S11 bin=GWC2_Methylomirabilis_70_24 species=Alicyclobacillus acidocaldarius genus=Alicyclobacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
30S ribosomal protein S11
Tax=GWA2_Rokubacteria_70_23_curated
PLM4_32_b1_sep16_scaffold_544_6
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists


comp(3384..3788)
DNA (405bp) protein (135aa)
Ribosomal protein S13 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=unknown taxon_order=Synergistales taxon_class=Synergistia phylum=Synergistetes tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
SSU ribosomal protein S13P
Tax=GWC2_Rokubacteria_70_16_curated
PLM4_32_b1_sep16_scaffold_544_7
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(3797..3910)
DNA (114bp) protein (38aa)
50S ribosomal protein L36 bin=GWF2_Methylomirabilis_70_14 species=unknown genus=unknown taxon_order=unknown taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
Tax=GWA2_Rokubacteria_70_23_curated
PLM4_32_b1_sep16_scaffold_544_8
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(4003..4221)
DNA (219bp) protein (73aa)
Translation initiation factor IF-1 bin=GWF2_Methylomirabilis_70_14 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Firmicutes tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
infA; translation initiation factor IF-1
Tax=GWA2_Rokubacteria_70_23_curated
PLM4_32_b1_sep16_scaffold_544_9
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(4236..5000)
DNA (765bp) protein (255aa)
methionine aminopeptidase, type I (EC:3.4.11.18)
Methionine aminopeptidase bin=GWC2_Methylomirabilis_70_24 species=Granulicella mallensis genus=Granulicella taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
Tax=GWA2_Rokubacteria_70_23_curated
PLM4_32_b1_sep16_scaffold_544_10
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(4997..5656)
DNA (660bp) protein (220aa)
Adenylate kinase bin=GWF2_Methylomirabilis_70_14 species=Desulfarculus baarsii genus=Desulfarculus taxon_order=Desulfarculales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
adk; adenylate kinase
Tax=GWC2_Rokubacteria_70_16_curated
PLM4_32_b1_sep16_scaffold_544_11
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists


comp(5653..6963)
DNA (1311bp) protein (437aa)
Protein translocase subunit SecY bin=GWC2_Methylomirabilis_70_16 species=Nitrospina gracilis genus=Nitrospina taxon_order=Nitrospinales taxon_class=Nitrospinia phylum=Nitrospinae tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
secY; preprotein translocase subunit SecY
Tax=GWC2_Rokubacteria_70_16_curated
PLM4_32_b1_sep16_scaffold_544_12
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists


comp(6960..7436)
DNA (477bp) protein (159aa)
50S ribosomal protein L15 bin=GWF2_Methylomirabilis_70_14 species=Pelobacter carbinolicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
rplO; 50S ribosomal protein L15
Tax=GWC2_Rokubacteria_70_16_curated
PLM4_32_b1_sep16_scaffold_544_13
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists


comp(7433..7615)
DNA (183bp) protein (61aa)
50S ribosomal protein L30 bin=GWF2_Methylomirabilis_70_14 species=Pseudoramibacter alactolyticus genus=Pseudoramibacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
rpmD; 50S ribosomal protein L30
Tax=GWA2_Rokubacteria_70_23_curated
PLM4_32_b1_sep16_scaffold_544_14
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists


comp(7599..8129)
DNA (531bp) protein (177aa)
30S ribosomal protein S5 bin=GWC2_Methylomirabilis_70_16 species=Ammonifex degensii genus=Ammonifex taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
30S ribosomal protein S5
Tax=GWC2_Rokubacteria_70_16_curated
PLM4_32_b1_sep16_scaffold_544_15
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists


comp(8144..8509)
DNA (366bp) protein (122aa)
50S ribosomal protein L18 bin=GWC2_Methylomirabilis_70_24 species=Carboxydothermus hydrogenoformans genus=Carboxydothermus taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
rplR; 50S ribosomal protein L18
Tax=GWC2_Rokubacteria_70_16_curated
PLM4_32_b1_sep16_scaffold_544_16
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists


comp(8509..9051)
DNA (543bp) protein (181aa)
50S ribosomal protein L6 bin=GWC2_Methylomirabilis_70_16 species=Leptolyngbya sp. PCC 6406 genus=Leptolyngbya taxon_order=Oscillatoriales taxon_class=unknown phylum=Cyanobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
50S ribosomal protein L6
Tax=GWC2_Rokubacteria_70_16_curated
PLM4_32_b1_sep16_scaffold_544_17
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists


comp(9066..9458)
DNA (393bp) protein (131aa)
30S ribosomal protein S8 bin=GWC2_Methylomirabilis_70_16 species=Alicyclobacillus acidocaldarius genus=Alicyclobacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
30S ribosomal protein S8
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
PLM4_32_b1_sep16_scaffold_544_18
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists


comp(9463..9648)
DNA (186bp) protein (62aa)
30S ribosomal protein S14 type Z bin=GWC2_Methylomirabilis_70_24 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
rpsZ; 30S ribosomal protein S14
Tax=GWA2_Rokubacteria_70_23_curated
PLM4_32_b1_sep16_scaffold_544_19
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists


comp(9651..10361)
DNA (711bp) protein (237aa)
50S ribosomal protein L5 bin=GWC2_Methylomirabilis_70_24 species=Candidatus Koribacter versatilis genus=Candidatus Koribacter taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
rplE; 50S ribosomal protein L5
Tax=GWA2_Rokubacteria_70_23_curated
PLM4_32_b1_sep16_scaffold_544_20
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists


comp(10369..10695)
DNA (327bp) protein (109aa)
50S ribosomal protein L24 bin=GWC2_Methylomirabilis_70_16 species=Thermobacillus composti genus=Thermobacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
50S ribosomal protein L24
Tax=GWC2_Rokubacteria_70_16_curated
PLM4_32_b1_sep16_scaffold_544_21
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists


comp(10706..11074)
DNA (369bp) protein (123aa)
50S ribosomal protein L14 bin=GWF2_Methylomirabilis_70_14 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
rplN; 50S ribosomal protein L14
Tax=GWA2_Rokubacteria_70_23_curated
PLM4_32_b1_sep16_scaffold_544_22
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists


comp(11071..11319)
DNA (249bp) protein (83aa)
30S ribosomal protein S17 bin=GWF2_Methylomirabilis_70_14 species=Desulfobacca acetoxidans genus=Desulfobacca taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
30S ribosomal protein S17
Tax=GWA2_Rokubacteria_70_23_curated
PLM4_32_b1_sep16_scaffold_544_23
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists


comp(11341..11547)
DNA (207bp) protein (69aa)
50S ribosomal protein L29; K02904 large subunit ribosomal protein L29 bin=bin7_NC10_sister species=Kyrpidia tusciae genus=Kyrpidia taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=bin7_NC10_sister organism_group=NC10
50S ribosomal protein L29
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM4_32_b1_sep16_scaffold_544_24
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists


comp(11563..11979)
DNA (417bp) protein (139aa)
50S ribosomal protein L16 bin=GWC2_Methylomirabilis_70_16 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
rplP; 50S ribosomal protein L16
Tax=GWC2_Rokubacteria_70_16_curated
PLM4_32_b1_sep16_scaffold_544_25
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists


comp(11986..12636)
DNA (651bp) protein (217aa)
30S ribosomal protein S3 bin=GWC2_Methylomirabilis_70_24 species=unknown genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
30S ribosomal protein S3
Tax=GWA2_Rokubacteria_70_23_curated
PLM4_32_b1_sep16_scaffold_544_26
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists


comp(12639..13016)
DNA (378bp) protein (126aa)
50S ribosomal protein L22 bin=GWC2_Methylomirabilis_70_24 species=unknown genus=unknown taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
rplV; 50S ribosomal protein L22
Tax=GWA2_Rokubacteria_70_23_curated
PLM4_32_b1_sep16_scaffold_544_27
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists


comp(13019..13312)
DNA (294bp) protein (98aa)
SSU ribosomal protein S19p (S15e) bin=GWA2_Methylomirabilis_73_35 species=Nitrospina gracilis genus=Nitrospina taxon_order=Nitrospinales taxon_class=Nitrospinia phylum=Nitrospinae tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
rpsS; 30S ribosomal protein S19
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM4_32_b1_sep16_scaffold_544_28
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists


comp(13328..14155)
DNA (828bp) protein (276aa)
50S ribosomal protein L2 bin=GWC2_Methylomirabilis_70_24 species=unknown genus=Thermaerobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
rplB; 50S ribosomal protein L2
Tax=GWA2_Rokubacteria_70_23_curated
PLM4_32_b1_sep16_scaffold_544_29
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists


comp(14160..14450)
DNA (291bp) protein (97aa)
50S ribosomal protein L23 bin=GWC2_Methylomirabilis_70_16 species=Thermodesulfatator indicus genus=Thermodesulfatator taxon_order=Thermodesulfobacteriales taxon_class=Thermodesulfobacteria phylum=Thermodesulfobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
50S ribosomal protein L25/L23
Tax=GWA2_Rokubacteria_70_23_curated
PLM4_32_b1_sep16_scaffold_544_30
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists


comp(14447..15073)
DNA (627bp) protein (209aa)
50S ribosomal protein L4 bin=GWC2_Methylomirabilis_70_24 species=Alicyclobacillus hesperidum genus=Alicyclobacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
50S ribosomal protein L4
Tax=GWA2_Rokubacteria_70_23_curated
Displaying items 1-30 of 33 in total

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