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PLM4_32_b1_sep16_scaffold_621

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Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_32_b1_sep16_scaffold_621_1
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

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3..422
DNA (420bp) protein (140aa)
Monogalactosyldiacylglycerol synthase bin=GWA2_Methylomirabilis_73_35 species=Thermaerobacter marianensis genus=Thermaerobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
monogalactosyldiacylglycerol synthase
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
PLM4_32_b1_sep16_scaffold_621_2
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

419..2209
DNA (1791bp) protein (597aa)
TPR repeat-containing protein bin=GWC2_Methylomirabilis_70_24 species=unknown genus=Cyanothece taxon_order=Chroococcales taxon_class=unknown phylum=Cyanobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
hypothetical protein
Tax=GWA2_Rokubacteria_70_23_curated
PLM4_32_b1_sep16_scaffold_621_3
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

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comp(2327..2941)
DNA (615bp) protein (205aa)
id=4290015 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Tax=GWC2_Rokubacteria_70_16_curated
PLM4_32_b1_sep16_scaffold_621_4
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

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3051..3842
DNA (792bp) protein (264aa)
Probable phosphotransferase bin=GWC2_Methylomirabilis_70_16 species=Pelagibaca bermudensis genus=Pelagibaca taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
HAD family hydrolase
Tax=GWC2_Rokubacteria_70_16_curated
PLM4_32_b1_sep16_scaffold_621_5
R_OP11_Levybacteria_37_33, Levybacteria, Microgenomates, Bacteria

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3845..4540
DNA (696bp) protein (232aa)
(alpha)-aspartyl dipeptidase Tax=Streptomyces RepID=UPI0003800735
peptidase E
Tax=RIFCSPHIGHO2_01_FULL_OP11_Levybacteria_37_33_curated
PLM4_32_b1_sep16_scaffold_621_6
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

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comp(4676..5380)
DNA (705bp) protein (235aa)
id=3659328 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Tax=GWC2_Rokubacteria_70_16_curated
PLM4_32_b1_sep16_scaffold_621_7
Microscilla marina, Microscilla, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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5687..6400
DNA (714bp) protein (238aa)
Membrane protein, putative Tax=Microscilla marina ATCC 23134 RepID=A1ZUD0_9BACT
Membrane protein, putative {ECO:0000313|EMBL:EAY25949.1}; species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Microscilla.;" source="Microscilla marina ATCC 23134.;"
hypothetical protein
PLM4_32_b1_sep16_scaffold_621_8
CSP1_5_NC10, NC10, Bacteria

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6397..7464
DNA (1068bp) protein (356aa)
hypothetical protein bin=bin3_NC10 species=Pseudogulbenkiania ferrooxidans genus=Pseudogulbenkiania taxon_order=Neisseriales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=bin3_NC10 organism_group=NC10
hypothetical protein
Tax=CSP1_5_NC10
PLM4_32_b1_sep16_scaffold_621_9
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(7461..8204)
DNA (744bp) protein (248aa)
Integral membrane protein TerC bin=GWF2_Methylomirabilis_70_14 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
membrane protein
Tax=GWA2_Rokubacteria_70_23_curated
PLM4_32_b1_sep16_scaffold_621_10
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(8225..9166)
DNA (942bp) protein (314aa)
Putative oxidoreductase bin=GWF2_Methylomirabilis_70_14 species=Thermomicrobium roseum genus=Thermomicrobium taxon_order=Thermomicrobiales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
putative oxidoreductase
Tax=GWA2_Rokubacteria_70_23_curated
PLM4_32_b1_sep16_scaffold_621_11
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

9186..10490
DNA (1305bp) protein (435aa)
Biotin carboxylase-like protein bin=GWC2_Methylomirabilis_70_16 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
hypothetical protein
Tax=GWC2_Rokubacteria_70_16_curated
PLM4_32_b1_sep16_scaffold_621_12
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

10545..10982
DNA (438bp) protein (146aa)
id=14626169 bin=bin7_NC10_sister tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM4_32_b1_sep16_scaffold_621_13
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

10995..11957
DNA (963bp) protein (321aa)
Binding-protein-dependent transport systems inner membrane component bin=GWF2_Methylomirabilis_70_14 species=Roseiflexus castenholzii genus=Roseiflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
dipeptide transport system permease DppB
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
PLM4_32_b1_sep16_scaffold_621_14
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

11954..12793
DNA (840bp) protein (280aa)
Putative peptide ABC transporter permease protein bin=GWF2_Methylomirabilis_70_14 species=alpha proteobacterium BAL199 genus=unknown taxon_order=unknown taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
dppC7; peptide ABC transporter permease
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
PLM4_32_b1_sep16_scaffold_621_15
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

12822..14441
DNA (1620bp) protein (540aa)
Putative periplasmic dipeptide transport substrate-binding protein bin=GWF2_Methylomirabilis_70_14 species=Thermomicrobium roseum genus=Thermomicrobium taxon_order=Thermomicrobiales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
putative periplasmic dipeptide transport substrate-binding protein
Tax=GWA2_Rokubacteria_73_35_curated
PLM4_32_b1_sep16_scaffold_621_16
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

14527..14943
DNA (417bp) protein (139aa)
Pyridoxamine 5'-phosphate oxidase-related FMN-binding protein bin=GWF2_Methylomirabilis_70_14 species=Frankia sp. EUN1f genus=Frankia taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
Tax=GWA2_Rokubacteria_70_23_curated
PLM4_32_b1_sep16_scaffold_621_17
Rhodoferax ferrireducens, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14963..15376
DNA (414bp) protein (138aa)
Cupin 2 protein Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21XR8_RHOFD
cupin 2 protein
Cupin 2 protein {ECO:0000313|EMBL:ABD69435.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Rhodoferax.;" source="Rhodoferax ferrireducens (strain ATCC BAA-621 / DSM 15236 / T118); (Albidiferax ferrireducens).;"
PLM4_32_b1_sep16_scaffold_621_18
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15736..16554
DNA (819bp) protein (273aa)
Uncharacterized protein Tax=Burkholderia phymatum (strain DSM 17167 / STM815) RepID=B2JID2_BURP8
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM4_32_b1_sep16_scaffold_621_19
unknown

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16768..17187
DNA (420bp) protein (140aa)

This feature has no annotations

PLM4_32_b1_sep16_scaffold_621_20
Paenibacillus sp. MSt1, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

17225..17635
DNA (411bp) protein (137aa)
Uncharacterized protein Tax=Leptospira alstoni RepID=M6CJH3_9LEPT
Polyketide cyclase {ECO:0000313|EMBL:KEQ25178.1}; species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus sp. MSt1.;"
activator of Hsp90 ATPase 1 family protein
Displaying 20 items

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