ggKbase home page

PLM4_32_b1_sep16_scaffold_838

Search features with annotation key words

Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_32_b1_sep16_scaffold_838_1
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

3..686
DNA (684bp) protein (228aa)
HAD-superfamily hydrolase, subfamily IIA bin=GWF2_Methylomirabilis_70_14 species=Oceanithermus profundus genus=Oceanithermus taxon_order=Thermales taxon_class=Deinococci phylum=Deinococcus-Thermus tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
had-superfamily hydrolase, subfamily iia
Tax=GWA2_Rokubacteria_70_23_curated
PLM4_32_b1_sep16_scaffold_838_2
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

683..2326
DNA (1644bp) protein (548aa)
FAD dependent oxidoreductase bin=GWF2_Methylomirabilis_70_14 species=Thermobaculum terrenum genus=Thermobaculum taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Glycerol-3-phosphate dehydrogenase
Tax=GWA2_Rokubacteria_70_23_curated
PLM4_32_b1_sep16_scaffold_838_3
unknown

Not on your lists

2326..2688
DNA (363bp) protein (121aa)

This feature has no annotations

PLM4_32_b1_sep16_scaffold_838_4
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(2704..4263)
DNA (1560bp) protein (520aa)
Oligopeptide ABC transpoter oligopeptide-binding protein bin=GWF2_Methylomirabilis_70_14 species=Thermomicrobium roseum genus=Thermomicrobium taxon_order=Thermomicrobiales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
oligopeptide ABC transporter substrate-binding protein
Tax=GWA2_Rokubacteria_70_23_curated
PLM4_32_b1_sep16_scaffold_838_5
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

4432..5793
DNA (1362bp) protein (454aa)
Sugar ABC transporter, substrate-binding component bin=GWC2_Methylomirabilis_70_16 species=Azospirillum brasilense genus=Azospirillum taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
sugar ABC transporter, substrate-binding component
Tax=GWC2_Rokubacteria_70_16_curated
PLM4_32_b1_sep16_scaffold_838_6
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

5824..6705
DNA (882bp) protein (294aa)
sn-glycerol 3-phosphate transport system permease protein bin=GWC2_Methylomirabilis_70_16 species=Azospirillum lipoferum genus=Azospirillum taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
sugar ABC transporter permease
Tax=GWC2_Rokubacteria_70_16_curated
PLM4_32_b1_sep16_scaffold_838_7
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

6705..7556
DNA (852bp) protein (284aa)
Sugar ABC transporter, permease component bin=GWC2_Methylomirabilis_70_16 species=Azospirillum brasilense genus=Azospirillum taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
sugar ABC transporter permease
Tax=GWC2_Rokubacteria_70_16_curated
PLM4_32_b1_sep16_scaffold_838_8
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

7553..8383
DNA (831bp) protein (277aa)
Glycerophosphodiester phosphodiesterase bin=GWF2_Methylomirabilis_70_14 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
glycerophosphodiester phosphodiesterase
Tax=GWC2_Rokubacteria_70_16_curated
PLM4_32_b1_sep16_scaffold_838_9
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

8380..9936
DNA (1557bp) protein (519aa)
glpK; glycerol kinase (EC:2.7.1.30)
Glycerol kinase bin=GWC2_Methylomirabilis_70_16 species=Meiothermus ruber genus=Meiothermus taxon_order=Thermales taxon_class=Deinococci phylum=Deinococcus-Thermus tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Tax=GWC2_Rokubacteria_70_16_curated
PLM4_32_b1_sep16_scaffold_838_10
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

9933..11060
DNA (1128bp) protein (376aa)
Extracellular solute-binding protein, family 1 bin=GWF2_Methylomirabilis_70_14 species=Syntrophobacter fumaroxidans genus=Syntrophobacter taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
extracellular solute-binding protein
Tax=GWA2_Rokubacteria_70_23_curated
PLM4_32_b1_sep16_scaffold_838_11
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

11083..12156
DNA (1074bp) protein (358aa)
ABC transporter related bin=GWF2_Methylomirabilis_70_14 species=Syntrophobacter fumaroxidans genus=Syntrophobacter taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
ABC transporter-like protein
Tax=GWC2_Rokubacteria_70_16_curated
PLM4_32_b1_sep16_scaffold_838_12
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

12264..13022
DNA (759bp) protein (253aa)
Binding-protein-dependent transport systems inner membrane component bin=GWF2_Methylomirabilis_70_14 species=Syntrophobacter fumaroxidans genus=Syntrophobacter taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
binding-protein-dependent transport system inner membrane protein
Tax=GWA2_Rokubacteria_70_23_curated
Displaying 12 items

View Taxonomy