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PLM4_32_b1_sep16_scaffold_889

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_32_b1_sep16_scaffold_889_1
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

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3..713
DNA (711bp) protein (237aa)
Phosphate/sulphate permease bin=GWC2_Methylomirabilis_70_16 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
phosphate/sulphate permease
Tax=GWC2_Rokubacteria_70_16_curated
PLM4_32_b1_sep16_scaffold_889_2
unknown

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710..907
DNA (198bp) protein (66aa)

This feature has no annotations

PLM4_32_b1_sep16_scaffold_889_3
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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904..1560
DNA (657bp) protein (219aa)
Lipid A biosynthesis acyltransferase bin=GWF2_Methylomirabilis_70_14 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Lipid A biosynthesis acyltransferase
Tax=GWA2_Rokubacteria_70_23_curated
PLM4_32_b1_sep16_scaffold_889_4
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

1554..2264
DNA (711bp) protein (237aa)
id=4852960 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Tax=GWC2_Rokubacteria_70_16_curated
PLM4_32_b1_sep16_scaffold_889_5
Caenorhabditis remanei, Caenorhabditis, Rhabditida, Chromadorea, Nematoda, Metazoa

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comp(2305..2538)
DNA (234bp) protein (78aa)
Putative uncharacterized protein Tax=Caenorhabditis remanei RepID=E3LML8_CAERE
Putative uncharacterized protein {ECO:0000313|EMBL:EFP02946.1}; species="Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis.;" source="Caenorhabditis remanei (Caenorhabditis vulgaris).;"
PLM4_32_b1_sep16_scaffold_889_6
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

2696..4069
DNA (1374bp) protein (458aa)
Lytic transglycosylase, SLT, LysM and LysM domain-containing bin=GWC2_Methylomirabilis_70_24 species=Geobacter sulfurreducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
lytic transglycosylase
Tax=GWA2_Rokubacteria_70_23_curated
PLM4_32_b1_sep16_scaffold_889_7
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

4073..4315
DNA (243bp) protein (81aa)
ThiamineS protein bin=GWC2_Methylomirabilis_70_16 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
sulfur carrier protein ThiS
Tax=GWC2_Rokubacteria_70_16_curated
PLM4_32_b1_sep16_scaffold_889_8
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

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4336..4590
DNA (255bp) protein (85aa)
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
PLM4_32_b1_sep16_scaffold_889_9
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

4627..5286
DNA (660bp) protein (220aa)
Alkylhydroperoxidase bin=GWC2_Methylomirabilis_70_16 species=Mesorhizobium alhagi genus=Mesorhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
PLM4_32_b1_sep16_scaffold_889_10
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

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comp(5157..6470)
DNA (1314bp) protein (438aa)
Uncharacterized protein bin=GWC2_Methylomirabilis_70_16 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
hypothetical protein
Tax=GWC2_Rokubacteria_70_16_curated
PLM4_32_b1_sep16_scaffold_889_trna_1
unknown

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6503..6596
DNA (94bp)
transferRNA SeC(p)
PLM4_32_b1_sep16_scaffold_889_11
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

6637..7194
DNA (558bp) protein (186aa)
hypothetical protein bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
Tax=CSP1_6_Rokubacteria
PLM4_32_b1_sep16_scaffold_889_12
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

7196..7714
DNA (519bp) protein (173aa)
id=4163878 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Tax=GWC2_Rokubacteria_70_16_curated
PLM4_32_b1_sep16_scaffold_889_13
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

7722..8009
DNA (288bp) protein (96aa)
id=2650398 bin=GWF2_Methylomirabilis_70_14 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=GWA2_Rokubacteria_70_23_curated
PLM4_32_b1_sep16_scaffold_889_14
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

7993..9402
DNA (1410bp) protein (470aa)
L-seryl-tRNA(Sec) selenium transferase (EC:2.9.1.1)
L-seryl-tRNA(Sec) selenium transferase bin=GWF2_Methylomirabilis_70_14 species=Desulfurivibrio alkaliphilus genus=Desulfurivibrio taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=GWC2_Rokubacteria_70_16_curated
PLM4_32_b1_sep16_scaffold_889_15
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

9603..11537
DNA (1935bp) protein (645aa)
selenocysteine-specific translation elongation factor (EC:2.7.7.4)
Selenocysteine-specific translation elongation factor SelB bin=GWC2_Methylomirabilis_70_24 species=Thermodesulfatator indicus genus=Thermodesulfatator taxon_order=Thermodesulfobacteriales taxon_class=Thermodesulfobacteria phylum=Thermodesulfobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
Tax=GWA2_Rokubacteria_70_23_curated
PLM4_32_b1_sep16_scaffold_889_16
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

11576..11767
DNA (192bp) protein (64aa)
Sec-independent protein translocase protein TatA bin=GWC2_Methylomirabilis_70_16 species=Prosthecochloris aestuarii genus=Prosthecochloris taxon_order=Chlorobiales taxon_class=Chlorobia phylum=Chlorobi tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
twin-arginine translocation protein, TatA/E family subunit
Tax=GWC2_Rokubacteria_70_16_curated
PLM4_32_b1_sep16_scaffold_889_17
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

11826..13334
DNA (1509bp) protein (503aa)
PMT family glycosyltransferase, 4-amino-4-deoxy-L-arabinose transferase bin=GWC2_Methylomirabilis_70_16 species=Methanobacterium sp. Maddingley MBC34 genus=Methanobacterium taxon_order=Methanobacteriales taxon_class=Methanobacteria phylum=Euryarchaeota tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
glycosyl transferase
Tax=GWC2_Rokubacteria_70_16_curated
Displaying 18 items

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