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PLM4_32_b1_sep16_scaffold_936

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_32_b1_sep16_scaffold_936_1
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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comp(1..258)
DNA (258bp) protein (86aa)
ParBc, ParB-like nuclease domain bin=GWC2_Methylomirabilis_70_24 species=Symbiobacterium thermophilum genus=Symbiobacterium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
parB-like partition protein
Tax=GWA2_Rokubacteria_70_23_curated
PLM4_32_b1_sep16_scaffold_936_2
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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comp(251..1012)
DNA (762bp) protein (254aa)
Chromosome partitioning ATPase Soj bin=GWC2_Methylomirabilis_70_16 species=Geobacter sulfurreducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
cobyrinic acid a,c-diamide synthase
Tax=GWA2_Rokubacteria_70_23_curated
PLM4_32_b1_sep16_scaffold_936_3
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

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comp(1096..3492)
DNA (2397bp) protein (799aa)
hypothetical protein; K03217 preprotein translocase subunit YidC bin=bin7_NC10_sister species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
Tax=CSP1_6_Rokubacteria
PLM4_32_b1_sep16_scaffold_936_4
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

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comp(3722..4081)
DNA (360bp) protein (120aa)
ribonuclease P protein component; K03536 ribonuclease P protein component [EC:3.1.26.5] bin=bin7_NC10_sister species=Kyrpidia tusciae genus=Kyrpidia taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=bin7_NC10_sister organism_group=NC10
ribonuclease P protein component
Tax=CSP1_6_Rokubacteria
PLM4_32_b1_sep16_scaffold_936_5
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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comp(4108..4242)
DNA (135bp) protein (45aa)
50S ribosomal protein L34 bin=GWA2_Methylomirabilis_73_35 species=Deinococcus maricopensis genus=Deinococcus taxon_order=Deinococcales taxon_class=Deinococci phylum=Deinococcus-Thermus tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
50S ribosomal protein L34
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM4_32_b1_sep16_scaffold_936_6
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

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4585..5895
DNA (1311bp) protein (437aa)
Chromosomal replication initiator protein DnaA bin=GWC2_Methylomirabilis_70_16 species=uncultured Acidobacteria bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
dnaA; chromosomal replication initiator protein dnaA
Tax=GWC2_Rokubacteria_70_16_curated
PLM4_32_b1_sep16_scaffold_936_7
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

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6063..7157
DNA (1095bp) protein (365aa)
dnaN; DNA polymerase III subunit beta (EC:2.7.7.7)
DNA polymerase III subunit beta bin=GWC2_Methylomirabilis_70_16 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Tax=GWC2_Rokubacteria_70_16_curated
PLM4_32_b1_sep16_scaffold_936_8
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

7182..8273
DNA (1092bp) protein (364aa)
DNA replication and repair protein RecF bin=GWF2_Methylomirabilis_70_14 species=Thermobacillus composti genus=Thermobacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
DNA replication and repair protein RecF
Tax=GWA2_Rokubacteria_70_23_curated
PLM4_32_b1_sep16_scaffold_936_9
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

8273..10648
DNA (2376bp) protein (792aa)
gyrB; DNA gyrase subunit B; K02470 DNA gyrase subunit B [EC:5.99.1.3] bin=bin7_NC10_sister species=Geobacter sulfurreducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
DNA gyrase subunit B
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
PLM4_32_b1_sep16_scaffold_936_10
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists


10667..13111
DNA (2445bp) protein (815aa)
gyrA; DNA gyrase subunit A (EC:5.99.1.3)
DNA gyrase subunit A bin=GWC2_Methylomirabilis_70_16 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Tax=GWC2_Rokubacteria_70_16_curated
PLM4_32_b1_sep16_scaffold_936_11
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

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13212..14192
DNA (981bp) protein (327aa)
Serine--tRNA ligase bin=GWC2_Methylomirabilis_70_16 species=Synergistes sp. 3_1_syn1 genus=Synergistes taxon_order=Synergistales taxon_class=Synergistia phylum=Synergistetes tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
seryl-tRNA synthetase
Tax=GWC2_Rokubacteria_70_16_curated
Displaying 11 items

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