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PLM4_32_b1_sep16_scaffold_3330

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_32_b1_sep16_scaffold_3330_1
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

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1..1362
DNA (1362bp) protein (454aa)
HNH endonuclease bin=GWC2_Methylomirabilis_70_16 species=Nakamurella multipartita genus=Nakamurella taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
HNH endonuclease
Tax=GWC2_Rokubacteria_70_16_curated
PLM4_32_b1_sep16_scaffold_3330_2
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

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comp(1456..4200)
DNA (2745bp) protein (915aa)
Uncharacterized protein bin=GWC2_Methylomirabilis_70_16 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Protein export membrane protein, SecD/SecF family
Tax=GWC2_Rokubacteria_70_16_curated
PLM4_32_b1_sep16_scaffold_3330_3
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(4226..4414)
DNA (189bp) protein (63aa)
Myo-inositol-1-phosphate synthase bin=GWF2_Methylomirabilis_70_14 species=unknown genus=Roseiflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
myo-inositol-1-phosphate synthase
Tax=GWA2_Rokubacteria_70_23_curated
PLM4_32_b1_sep16_scaffold_3330_4
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(4423..5328)
DNA (906bp) protein (302aa)
Myo-inositol-1-phosphate synthase bin=GWC2_Methylomirabilis_70_24 species=unknown genus=Roseiflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
ino1-like myo-inositol-1-phosphate synthase related
Tax=GWA2_Rokubacteria_70_23_curated
PLM4_32_b1_sep16_scaffold_3330_5
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(5419..6417)
DNA (999bp) protein (333aa)
Uncharacterized protein bin=GWF2_Methylomirabilis_70_14 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
Tax=GWA2_Rokubacteria_70_23_curated
PLM4_32_b1_sep16_scaffold_3330_6
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(6417..7589)
DNA (1173bp) protein (391aa)
Uncharacterized protein bin=GWF2_Methylomirabilis_70_14 species=Nitrospina gracilis genus=Nitrospina taxon_order=Nitrospinales taxon_class=Nitrospinia phylum=Nitrospinae tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
putative bifunctional sugar nucleotidyltransferase/phosphatidyltransferase
Tax=GWA2_Rokubacteria_70_23_curated
PLM4_32_b1_sep16_scaffold_3330_7
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(7591..8022)
DNA (432bp) protein (144aa)
Putative Sugar nucleotidyltransferase bin=GWC2_Methylomirabilis_70_16 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
putative sugar nucleotidyltransferase
Tax=GWC2_Rokubacteria_70_16_curated
PLM4_32_b1_sep16_scaffold_3330_8
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(8022..8330)
DNA (309bp) protein (103aa)
Putative Sugar nucleotidyltransferase bin=GWC2_Methylomirabilis_70_24 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
putative sugar nucleotidyltransferase
Tax=GWC2_Rokubacteria_70_16_curated
PLM4_32_b1_sep16_scaffold_3330_9
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

comp(8327..9661)
DNA (1335bp) protein (445aa)
phosphonopyruvate decarboxylase (EC:4.1.1.82) bin=bin7_NC10_sister species=Streptomyces rimosus genus=Streptomyces taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=bin7_NC10_sister organism_group=NC10
3-phosphonopyruvate decarboxylase
Tax=CSP1_6_Rokubacteria
PLM4_32_b1_sep16_scaffold_3330_10
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(9665..10297)
DNA (633bp) protein (211aa)
Uncharacterized protein bin=GWC2_Methylomirabilis_70_16 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
hypothetical protein
Tax=GWA2_Rokubacteria_70_23_curated
PLM4_32_b1_sep16_scaffold_3330_11
R_Rokubacteria_69_13, Rokubacteria, Bacteria

Not on your lists

comp(10323..10763)
DNA (441bp) protein (147aa)
Mce-related protein bin=GWC2_Methylomirabilis_70_16 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Mce-related protein
Tax=RIFCSPHIGHO2_02_FULL_Rokubacteria_69_13_curated
PLM4_32_b1_sep16_scaffold_3330_12
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(10777..11529)
DNA (753bp) protein (251aa)
Putative ABC transporter (ATP-binding protein) bin=GWC2_Methylomirabilis_70_24 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
ABC transporter ATP-binding protein
Tax=GWA2_Rokubacteria_70_23_curated
PLM4_32_b1_sep16_scaffold_3330_13
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(11526..12332)
DNA (807bp) protein (269aa)
Toluene transporter subunit: membrane component of ABC superfamily bin=GWC2_Methylomirabilis_70_16 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
toluene tolerance protein Ttg2B
Tax=GWC2_Rokubacteria_70_16_curated
PLM4_32_b1_sep16_scaffold_3330_14
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

12411..13193
DNA (783bp) protein (261aa)
hypothetical protein bin=bin7_NC10_sister species=Nitrosospira sp. APG3 genus=Nitrosospira taxon_order=Nitrosomonadales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
PLM4_32_b1_sep16_scaffold_3330_15
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

13215..14231
DNA (1017bp) protein (339aa)
Fe-S protein, radical SAM family bin=GWF2_Methylomirabilis_70_14 species=Candidatus Koribacter versatilis genus=Candidatus Koribacter taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Radical SAM superfamily enzyme
Tax=GWA2_Rokubacteria_70_23_curated
PLM4_32_b1_sep16_scaffold_3330_16
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

14242..14601
DNA (360bp) protein (120aa)
hypothetical protein bin=bin7_NC10_sister species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
Tax=CSP1_6_Rokubacteria
PLM4_32_b1_sep16_scaffold_3330_17
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

14570..15286
DNA (717bp) protein (239aa)
nucleoside phosphorylase bin=bin7_NC10_sister species=Thioflavicoccus mobilis genus=Thioflavicoccus taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
nucleoside phosphorylase
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
PLM4_32_b1_sep16_scaffold_3330_18
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

15719..16183
DNA (465bp) protein (155aa)
Hopanoid-associated sugar epimerase bin=GWC2_Methylomirabilis_70_16 species=Geobacter metallireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
NAD-dependent epimerase/dehydratase
Tax=GWC2_Rokubacteria_70_16_curated
Displaying 18 items

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