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PLM4_32_b1_sep16_scaffold_3836

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_32_b1_sep16_scaffold_3836_1
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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3..497
DNA (495bp) protein (165aa)
ABC transporter peptide-binding protein bin=GWF2_Methylomirabilis_70_14 species=unknown genus=Bradyrhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
peptide ABC transporter substrate-binding protein
Tax=GWA2_Rokubacteria_70_23_curated
PLM4_32_b1_sep16_scaffold_3836_2
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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511..1464
DNA (954bp) protein (318aa)
Peptide ABC transporter permease protein bin=GWF2_Methylomirabilis_70_14 species=unknown genus=Bradyrhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
peptide ABC transporter permease
Tax=GWA2_Rokubacteria_70_23_curated
PLM4_32_b1_sep16_scaffold_3836_3
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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1454..2356
DNA (903bp) protein (301aa)
Peptide ABC transporter permease protein bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Bradyrhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
ABC transporter permease
Tax=GWA2_Rokubacteria_73_35_curated
PLM4_32_b1_sep16_scaffold_3836_4
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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2437..3849
DNA (1413bp) protein (471aa)
Amidase bin=GWF2_Methylomirabilis_70_14 species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
amidase
Tax=GWA2_Rokubacteria_70_23_curated
PLM4_32_b1_sep16_scaffold_3836_5
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

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4137..4655
DNA (519bp) protein (173aa)
Putative uncharacterized protein bin=GWC2_Methylomirabilis_70_16 species=delta proteobacterium MLMS-1 genus=unknown taxon_order=unknown taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
hypothetical protein
Tax=GWC2_Rokubacteria_70_16_curated
PLM4_32_b1_sep16_scaffold_3836_6
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

4657..5442
DNA (786bp) protein (262aa)
Peptidase M48, Ste24p bin=GWC2_Methylomirabilis_70_16 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
peptidase M48, Ste24p
Tax=GWC2_Rokubacteria_70_16_curated
PLM4_32_b1_sep16_scaffold_3836_7
unknown

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comp(6007..6402)
DNA (396bp) protein (132aa)

This feature has no annotations

PLM4_32_b1_sep16_scaffold_3836_8
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

6624..7145
DNA (522bp) protein (174aa)
Ribosomal RNA small subunit methyltransferase H bin=GWC2_Methylomirabilis_70_16 species=Chloroflexus aggregans genus=Chloroflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
S-adenosyl-methyltransferase MraW
Tax=GWC2_Rokubacteria_70_16_curated
PLM4_32_b1_sep16_scaffold_3836_9
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

7142..7609
DNA (468bp) protein (156aa)
id=3374083 bin=GWC2_Methylomirabilis_70_24 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
hypothetical protein
Tax=GWA2_Rokubacteria_70_23_curated
PLM4_32_b1_sep16_scaffold_3836_10
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

7619..9679
DNA (2061bp) protein (687aa)
Peptidoglycan synthetase FtsI bin=GWC2_Methylomirabilis_70_16 species=Pelobacter propionicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
ftsI; peptidoglycan transglycosylase and transpeptidase FtsI
Tax=GWC2_Rokubacteria_70_16_curated
PLM4_32_b1_sep16_scaffold_3836_11
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

9684..10448
DNA (765bp) protein (255aa)
UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase (EC:6.3.2.13)
UDP-N-acetylmuramyl-tripeptide synthetase bin=GWC2_Methylomirabilis_70_16 species=Thermaerobacter subterraneus genus=Thermaerobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Tax=GWC2_Rokubacteria_70_16_curated
Displaying 11 items

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