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PLM4_32_b1_sep16_scaffold_3971

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_32_b1_sep16_scaffold_3971_1
CSP1_5_NC10, NC10, Bacteria

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1..684
DNA (684bp) protein (228aa)
glycosyl transferase family 2 protein (EC:2.4.1.-) bin=bin3_NC10 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=bin3_NC10 organism_group=NC10
family 2 glycosyl transferase
Tax=CSP1_5_NC10
PLM4_32_b1_sep16_scaffold_3971_2
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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701..1582
DNA (882bp) protein (294aa)
dapA2; 4-hydroxy-tetrahydrodipicolinate synthase 2 (EC:4.3.3.7)
hypothetical protein Tax=Zymophilus raffinosivorans RepID=UPI00036FEEF4
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
PLM4_32_b1_sep16_scaffold_3971_3
R_Melainabacteria_34_12, Melainabacteria, Bacteria

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1579..1941
DNA (363bp) protein (121aa)
hypothetical protein Tax=filamentous cyanobacterium ESFC-1 RepID=UPI00036050EB
FKBP-type peptidylprolyl isomerase
Tax=RIFCSPHIGHO2_02_FULL_Melainabacteria_34_12_curated
PLM4_32_b1_sep16_scaffold_3971_4
Desulfovibrio magneticus, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

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1976..2296
DNA (321bp) protein (107aa)
Uncharacterized protein Tax=Desulfovibrio magneticus (strain ATCC 700980 / DSM 13731 / RS-1) RepID=C4XKL2_DESMR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAH76952.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio magneticus (strain ATCC 700980 / DSM 13731 / RS-1).;"
PLM4_32_b1_sep16_scaffold_3971_5
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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2354..2830
DNA (477bp) protein (159aa)
Ferritin Dps family protein bin=GWA2_Methylomirabilis_73_35 species=Candidatus Nitrosoarchaeum koreensis genus=Candidatus Nitrosoarchaeum taxon_order=Nitrosopumilales taxon_class=unknown phylum=Thaumarchaeota tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
DNA-binding ferritin-like protein (oxidative damage protectant)
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM4_32_b1_sep16_scaffold_3971_6
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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comp(2831..3661)
DNA (831bp) protein (277aa)
Uncharacterized protein bin=GWC2_Methylomirabilis_70_24 species=planctomycete KSU-1 genus=unknown taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
hypothetical protein
Tax=GWA2_Rokubacteria_70_23_curated
PLM4_32_b1_sep16_scaffold_3971_7
unknown

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comp(3727..3963)
DNA (237bp) protein (79aa)

This feature has no annotations

PLM4_32_b1_sep16_scaffold_3971_8
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

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4044..4724
DNA (681bp) protein (227aa)
Putative F420-dependent oxidoreductase bin=GWC2_Methylomirabilis_70_16 species=Ktedonobacter racemifer genus=Ktedonobacter taxon_order=Ktedonobacterales taxon_class=Ktedonobacteria phylum=Chloroflexi tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Luciferase-like monooxygenase superfamily
Tax=GWC2_Rokubacteria_70_16_curated
PLM4_32_b1_sep16_scaffold_3971_9
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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comp(4721..5557)
DNA (837bp) protein (279aa)
Polysaccharide deacetylase bin=GWC2_Methylomirabilis_70_16 species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
polysaccharide deacetylase
Tax=GWA2_Rokubacteria_70_23_curated
PLM4_32_b1_sep16_scaffold_3971_10
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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5645..6580
DNA (936bp) protein (312aa)
MoxR-like ATPase (EC:3.6.3.-)
MoxR-like ATPase bin=GWC2_Methylomirabilis_70_24 species=Candidatus Chloracidobacterium thermophilum genus=Candidatus Chloracidobacterium taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
Tax=GWA2_Rokubacteria_70_23_curated
PLM4_32_b1_sep16_scaffold_3971_11
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

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6587..7627
DNA (1041bp) protein (347aa)
Putative uncharacterized protein bin=GWF2_Methylomirabilis_70_14 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
Tax=GWC2_Rokubacteria_70_16_curated
PLM4_32_b1_sep16_scaffold_3971_12
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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7629..9683
DNA (2055bp) protein (685aa)
Transglutaminase domain protein bin=GWF2_Methylomirabilis_70_14 species=Haliangium ochraceum genus=Haliangium taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
transglutaminase
Tax=GWA2_Rokubacteria_70_23_curated
PLM4_32_b1_sep16_scaffold_3971_13
unknown

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comp(10223..10441)
DNA (219bp) protein (73aa)

This feature has no annotations

PLM4_32_b1_sep16_scaffold_3971_14
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

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comp(10748..11188)
DNA (441bp) protein (147aa)
CoA-binding domain-containing protein bin=GWC2_Methylomirabilis_70_16 species=Hydrocarboniphaga effusa genus=Hydrocarboniphaga taxon_order=Xanthomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
CoA-binding protein
Tax=GWC2_Rokubacteria_70_16_curated
PLM4_32_b1_sep16_scaffold_3971_15
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

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11236..11844
DNA (609bp) protein (203aa)
cobO; cob(I)yrinic acid a,c-diamide adenosyltransferase (EC:2.5.1.17)
ATP--cobalamin adenosyltransferase bin=GWC2_Methylomirabilis_70_16 species=Candidatus Poribacteria sp. WGA-A3 genus=unknown taxon_order=unknown taxon_class=unknown phylum=Poribacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Tax=GWC2_Rokubacteria_70_16_curated
PLM4_32_b1_sep16_scaffold_3971_16
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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11828..12340
DNA (513bp) protein (171aa)
GCN5-related N-acetyltransferase bin=GWC2_Methylomirabilis_70_24 species=Marinobacter hydrocarbonoclasticus genus=Marinobacter taxon_order=Alteromonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
N-acetyltransferase GCN5
Tax=GWA2_Rokubacteria_70_23_curated
PLM4_32_b1_sep16_scaffold_3971_17
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

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12385..13623
DNA (1239bp) protein (413aa)
Citrate transporter Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01YG3_SOLUE
citrate transporter
Citrate transporter {ECO:0000313|EMBL:ABJ85302.1}; species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatus (strain Ellin6076).;"
PLM4_32_b1_sep16_scaffold_3971_18
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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13741..14940
DNA (1200bp) protein (400aa)
ligB; ATP-dependent DNA ligase (EC:6.5.1.1)
Probable DNA ligase bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=GWA2_Rokubacteria_73_35_curated
Displaying 18 items

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