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PLM4_32_b1_sep16_scaffold_3837_5

Organism: PLM4_32_b1_sep16_Rokubacteria_71_14

near complete RP 50 / 55 MC: 2 BSCG 48 / 51 MC: 1 ASCG 13 / 38 MC: 2
Location: comp(3235..5964)

Top 3 Functional Annotations

Value Algorithm Source
rpoC; RNA polymerase, beta prime subunit (EC:2.7.7.6) similarity KEGG
DB: KEGG
  • Identity: 61.8
  • Coverage: 904.0
  • Bit_score: 1110
  • Evalue 0.0
DNA-directed RNA polymerase subunit beta' bin=GWF2_Methylomirabilis_70_14 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis similarity UNIREF
DB: UNIREF100
  • Identity: 82.3
  • Coverage: 909.0
  • Bit_score: 1488
  • Evalue 0.0
Tax=GWA2_Rokubacteria_70_23_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 82.5
  • Coverage: 908.0
  • Bit_score: 1485
  • Evalue 0.0

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Taxonomy

GWA2_Rokubacteria_70_23_curated → Rokubacteria → Bacteria

Sequences

DNA sequence
Length: 2730
ATGGAAGCCCAGATGGAGACGCAGGTGCTGATGCTGTCCGCCAACAATATCCTGTCGCCCTCCAACGGGGCGCCGGTGGCGGTGCCGACCCAGGACATGGTGTTCGGCATCTACTACATGACCAAGGAGCGCCCGGGGTCCAAGGGCGAGGGCCGGCTCTTCGCGGATTCGGAGGACCTCCGGATCGCCTACGACAACGAGGACGTGGACCTGCAGGCCCGCATCCGGCTGCGCTACAACGGCACCATCATCGAGACCACGGTCGGCCGCACCCTCTTCAACGAGGTGGTGCCGGAGCCGCTCCGGTTCCTCAACAAGGAGCTGAAGAAGAAGGAGATCGGCCAGCTGATCTCCGACTGCTACAACCGGCTCGGCAACGAGGCGACCGTCACCTTCCTCGACGAGCTGAAGGACGTCGGCTTCCGCTACGCGACCCTGTCCGGGCTCAGCATCGGCATCGTGGACATGCACGTGCCCTCGGCCAAGGGCGAGATCATCGGGCGCGCCCGTCAGAACGTCAACGAGGTGGAGCAGCAGTACCAGGACGGCGTCATCACCAACGGCGAGCGCTACAACAAGGTGGTCGACATCTGGGCCCACGTGACCGAGCAGATCGCGGATCAGCTCTTCAAGGAGATGGAGGTGCGCGCCGACAACGGCGACTTCAACCCCATCTTCATGATGGCCGACTCCGGGGCGCGGGGCTCCAAGCAGCAGATCCGGCAGCTCGCGGGCATGCGTGGCCTCATGGCCAAGCCGAGCGGCGAGGTCATCGAGACGCCCATCACGTCGAACTTCCGCGAGGGCCTCACCGTCCTCGAGTACTTCACGTCGACCCACGGCGCCCGCAAGGGCCTGGCCGACACCGCGCTGAAGACGGCGGACTCCGGCTACCTGACCCGCCGCCTGGTGGACGTGGCTCAGGACGTGATCATCTCCGAGTACGACTGCGGCACCGTGAAGTACATCGAGGCCTCGCCGCTCATCGAGGGCGGCGACATCATCCAGTCGCTCCGCGACCGGGTGCTGGGCCGGGTGGCCGCGGGCGACATCCGCGACCCCTACACCGGCGAGATCATCGTGCAGGCCAACTGCGAGATCGTGGAAGACCTGGCCCAGAAGATCGAAGATTCGGGCCTCGAGCGGGTCCGCATCCGGTCCGCGCTCACCTGCGAGTCCAAGCGCGGCATCTGCGTGATGTGCTACGGGCGTAACCTGGGCACCGGCAACCTGGCCGAGCTCGGGGAGGCGGTCGGCATCATCGCGGCCCAGTCCATCGGCGAGCCGGGCACCCAGCTCACGATGCGGACCTTCCACATCGGCGGCACCGCGAGCAAGGTCGTGGCCACCTCCCGGCACGACGCCAAGAACCCCGGCGTGTTGACCTACCACAATATCCGGTGGGTCGAGAACCGCGACGGCGAAGTGGTGGCCCTGAACCGAAACGGAGAAGTGATCCTGCACGACGAGAAGGGCCGCGAGAAGGAGCGGTATCCGGTCGTCCCCGGCGCCAAGATCAAGTTCCGGGACGGGGCCCGGGTGCCGAAGAGCGGCGTCACCATCGTGGAGTGGGACCCGTTCACGACCCCGATCCTCACCGAGGTGACGGGCACCATCGCCTTCCGGGACGTGGTGGACGAGGTCACGATCCGCGAAGAGATCGACGAGGTCACCGGTCTGGCCCAGCGGGTCATCATCGAGGATCCGGAGAACAAGCTGCAGCCGCGGGTGTCGGTGAAGGCCCCCGCGGGGAGCGCCGAGGCGCCGGGAGCGGTGGATGCGCTCGGTGAGACGCGTGGCCGCTACATGCTGCCGGTGGGTGCCTATCTCCTGGTGGCCGACGGAACCGACGTGCACGCGGGCGACATCATCGCCAAGATCCCGCGGGAGTCGACCAAGACCAAGGACATCACCGGCGGGCTGCCGCGGGTGGCCGAGCTGTTCGAGGCGCGCAAGCCCCGCGAGCAGGCGGTCATCACCGAGATCGACGGAGTGGTGGAGTTCGCCGGCTTCGTGAAGGGCATGCGGAAGATGATCATCCGCGCCGACGACAGCGAGACCAAGGAGTACCTGATCCCGAGCGGCAAGCACATCTCGGTCCGCGAAGGCGACCGGGTGAAGGCGGGCGAGGCCCTCATGGGCGGCTCGCCCAACCCACACGACTACCTGGCCGTGCTCGGCGACCGGGAGCTGCAGCGGTACCTCGTCAACGAGGTGCAGGAGGTCTACCGGCTGCAGGGTGTGACCATCAACGACAAGCACATCGAGATCATCGTGCGCCAGATGCTCCGGCGCGTGCGTATCGAGGAGGTCGGCGGCACCGAGTTCGTGGTGGGCGAGCTGGTCGACAAGTTCGTCTTCCAGGACGAGAACGACAAGGCGGTCGCGGCGGGCAAGGCGGCGGCCACCGCCCAGCCGGTCCTGCTGGGCATCACCAAGGCCTCCCTGTCCACCGACAGCTTCATCTCGGCCGCGTCCTTCCAGGAGACCACCCGGGTCCTGACCGAGGCCGCCATCAGCGGCAAGGTCGACGACCTGCGCGGGCTCAAGGAGAACGTGATCGTGGGCCGGCTCATCCCGGCCGGGACCGGGCTCAGCAACTACACCCGGGTGGAGGTCCTGAGCCAGGGCGGTGAGGAGGAGGCCCCGGTCGAGGTGGCGGCCGCGGCGCTCCCGGAGATGGCGGAGGCGGTGGACGGAGAAGACGACCCGGTCGCCGAGGCCGGGTAG
PROTEIN sequence
Length: 910
MEAQMETQVLMLSANNILSPSNGAPVAVPTQDMVFGIYYMTKERPGSKGEGRLFADSEDLRIAYDNEDVDLQARIRLRYNGTIIETTVGRTLFNEVVPEPLRFLNKELKKKEIGQLISDCYNRLGNEATVTFLDELKDVGFRYATLSGLSIGIVDMHVPSAKGEIIGRARQNVNEVEQQYQDGVITNGERYNKVVDIWAHVTEQIADQLFKEMEVRADNGDFNPIFMMADSGARGSKQQIRQLAGMRGLMAKPSGEVIETPITSNFREGLTVLEYFTSTHGARKGLADTALKTADSGYLTRRLVDVAQDVIISEYDCGTVKYIEASPLIEGGDIIQSLRDRVLGRVAAGDIRDPYTGEIIVQANCEIVEDLAQKIEDSGLERVRIRSALTCESKRGICVMCYGRNLGTGNLAELGEAVGIIAAQSIGEPGTQLTMRTFHIGGTASKVVATSRHDAKNPGVLTYHNIRWVENRDGEVVALNRNGEVILHDEKGREKERYPVVPGAKIKFRDGARVPKSGVTIVEWDPFTTPILTEVTGTIAFRDVVDEVTIREEIDEVTGLAQRVIIEDPENKLQPRVSVKAPAGSAEAPGAVDALGETRGRYMLPVGAYLLVADGTDVHAGDIIAKIPRESTKTKDITGGLPRVAELFEARKPREQAVITEIDGVVEFAGFVKGMRKMIIRADDSETKEYLIPSGKHISVREGDRVKAGEALMGGSPNPHDYLAVLGDRELQRYLVNEVQEVYRLQGVTINDKHIEIIVRQMLRRVRIEEVGGTEFVVGELVDKFVFQDENDKAVAAGKAAATAQPVLLGITKASLSTDSFISAASFQETTRVLTEAAISGKVDDLRGLKENVIVGRLIPAGTGLSNYTRVEVLSQGGEEEAPVEVAAAALPEMAEAVDGEDDPVAEAG*