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PLM4_32_b1_sep16_scaffold_1107

Search features with annotation key words

Displaying items 1-30 of 46 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_32_b1_sep16_scaffold_1107_1
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(2..340)
DNA (339bp) protein (113aa)
Biotin carboxyl carrier protein Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A3Z7_GEMAT
biotin/lipoyl attachment domain-containing protein
Biotin/lipoyl attachment domain-containing protein {ECO:0000313|EMBL:AHG90952.1}; species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
PLM4_32_b1_sep16_scaffold_1107_2
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(337..1563)
DNA (1227bp) protein (409aa)
Uncharacterized protein Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A3Z8_GEMAT
(Uracil-5)-methyltransferase
Tax=GWC2_Gemmatimonadetes_71_10_curated
PLM4_32_b1_sep16_scaffold_1107_3
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(1560..3059)
DNA (1500bp) protein (500aa)
Acyl-CoA carboxylase alpha chain Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A3Z9_GEMAT
Carbamoyl-phosphate synthase L chain ATP-binding protein
Tax=RBG_16_Gemmatimonadetes_66_8_curated
PLM4_32_b1_sep16_scaffold_1107_4
RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated, Acidobacteria, Bacteria

Not on your lists

comp(3276..3518)
DNA (243bp) protein (81aa)
Protein of unknown function DUF2007
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated
PLM4_32_b1_sep16_scaffold_1107_5
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(3666..5219)
DNA (1554bp) protein (518aa)
Acyl-CoA carboxylase beta chain Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A400_GEMAT
carboxyl transferase
Tax=GWC2_Gemmatimonadetes_71_10_curated
PLM4_32_b1_sep16_scaffold_1107_6
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

5437..5721
DNA (285bp) protein (95aa)
S23 ribosomal protein Tax=Chlorobium phaeobacteroides (strain DSM 266) RepID=A1BJP6_CHLPD
S23 ribosomal protein
Tax=RBG_16_Gemmatimonadetes_66_8_curated
PLM4_32_b1_sep16_scaffold_1107_7
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists


comp(5781..7490)
DNA (1710bp) protein (570aa)
30S ribosomal protein S1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A406_GEMAT
RNA binding S1 domain protein
RNA binding S1 domain protein {ECO:0000313|EMBL:AHG90957.1}; species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
PLM4_32_b1_sep16_scaffold_1107_8
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(7641..8258)
DNA (618bp) protein (206aa)
Cytidylate kinase Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MI73_RHOM4
cytidylate kinase
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
PLM4_32_b1_sep16_scaffold_1107_9
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(8335..9624)
DNA (1290bp) protein (430aa)
3-phosphoshikimate 1-carboxyvinyltransferase
3-phosphoshikimate 1-carboxyvinyltransferase bin=GWC2_Proteo_65_14_Ab886 species=Candidatus Desulforudis audaxviator genus=Candidatus Desulforudis taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Proteo_65_14_Ab886 organism_group=Deltaproteobacteria
Tax=RBG_16_Gemmatimonadetes_66_8_curated
PLM4_32_b1_sep16_scaffold_1107_10
Candidatus Accumulibacter sp. BA-91, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9677..10963)
DNA (1287bp) protein (429aa)
Uncharacterized protein Tax=Xanthomonas axonopodis pv. punicae str. LMG 859 RepID=H1XMY5_9XANT
Uncharacterized protein {ECO:0000313|EMBL:KFB72276.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulibacter sp. BA-91.;"
PLM4_32_b1_sep16_scaffold_1107_11
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

11094..12056
DNA (963bp) protein (321aa)
General secretory pathway protein E bin=GWA2_Methylomirabilis_73_35 species=Thermosinus carboxydivorans genus=Thermosinus taxon_order=Selenomonadales taxon_class=Negativicutes phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
response regulator receiver modulated diguanylate cyclase
Tax=RBG_16_Gemmatimonadetes_66_8_curated
PLM4_32_b1_sep16_scaffold_1107_12
unknown

Not on your lists

12053..12547
DNA (495bp) protein (165aa)

This feature has no annotations

PLM4_32_b1_sep16_scaffold_1107_13
MPI_TA06_32_111, Bacteria

Not on your lists

12544..12999
DNA (456bp) protein (152aa)
hypothetical protein Tax=Sporichthya polymorpha RepID=UPI00036B79CF
hypothetical protein
Tax=MPI_TA06_32_111
PLM4_32_b1_sep16_scaffold_1107_14
unknown

Not on your lists

13028..13525
DNA (498bp) protein (166aa)

This feature has no annotations

PLM4_32_b1_sep16_scaffold_1107_15
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(13529..13969)
DNA (441bp) protein (147aa)
Putative pilin Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A9W7_GEMAT
African swine fever virus j13L
African swine fever virus j13L {ECO:0000313|EMBL:AHG91523.1}; species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
PLM4_32_b1_sep16_scaffold_1107_16
Deinococcus gobiensis, Deinococcus, Deinococcales, Deinococci, Deinococcus-Thermus, Bacteria

Not on your lists

comp(13966..14196)
DNA (231bp) protein (77aa)
Putative deoxynucleoside kinase Tax=Deinococcus gobiensis (strain DSM 21396 / JCM 16679 / CGMCC 1.7299 / I-0) RepID=H8GUF8_DEIGI
putative deoxynucleoside kinase
Putative deoxynucleoside kinase {ECO:0000313|EMBL:AFD26641.1}; species="Bacteria; Deinococcus-Thermus; Deinococci; Deinococcales; Deinococcaceae; Deinococcus.;" source="Deinococcus gobiensis (strain DSM 21396 / JCM 16679 / CGMCC 1.7299 /; I-0).;"
PLM4_32_b1_sep16_scaffold_1107_17
unknown

Not on your lists

14318..14656
DNA (339bp) protein (113aa)

This feature has no annotations

PLM4_32_b1_sep16_scaffold_1107_18
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(14653..15501)
DNA (849bp) protein (283aa)
hypothetical protein Tax=Gemmata obscuriglobus RepID=UPI00016C3DB7
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
PLM4_32_b1_sep16_scaffold_1107_19
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

15518..17485
DNA (1968bp) protein (656aa)
Putative uncharacterized protein Tax=Selenomonas noxia F0398 RepID=G5H451_9FIRM
methyl-accepting chemotaxis sensory transducer with Cache sensor
Tax=GWC2_Gemmatimonadetes_71_10_curated
PLM4_32_b1_sep16_scaffold_1107_20
unknown

Not on your lists

17494..19119
DNA (1626bp) protein (542aa)

This feature has no annotations

PLM4_32_b1_sep16_scaffold_1107_21
unknown

Not on your lists

19230..19424
DNA (195bp) protein (65aa)

This feature has no annotations

PLM4_32_b1_sep16_scaffold_1107_22
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(19432..21495)
DNA (2064bp) protein (688aa)
Putative uncharacterized protein Tax=Solibacter usitatus (strain Ellin6076) RepID=Q025W5_SOLUE
permease
Permease {ECO:0000313|EMBL:AHG87819.1}; species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
PLM4_32_b1_sep16_scaffold_1107_23
unknown

Not on your lists

21497..22015
DNA (519bp) protein (173aa)

This feature has no annotations

PLM4_32_b1_sep16_scaffold_1107_24
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(21981..22313)
DNA (333bp) protein (111aa)
hypothetical protein Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI00037E5928
transcriptional regulator, PadR-family
Transcriptional regulator, PadR-family {ECO:0000313|EMBL:AHG93879.1}; species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
PLM4_32_b1_sep16_scaffold_1107_25
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(22453..24105)
DNA (1653bp) protein (551aa)
DNA repair protein RecN Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A481_GEMAT
DNA repair protein RecN
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
PLM4_32_b1_sep16_scaffold_1107_26
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(24102..24953)
DNA (852bp) protein (284aa)
NAD kinase {ECO:0000256|HAMAP-Rule:MF_00361, ECO:0000256|SAAS:SAAS00037468}; EC=2.7.1.23 {ECO:0000256|HAMAP-Rule:MF_00361, ECO:0000256|SAAS:SAAS00037533};; ATP-dependent NAD kinase {ECO:0000256|HAMAP-Rule:MF_00361}; species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
Probable inorganic polyphosphate/ATP-NAD kinase Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=PPNK_GEMAT
inorganic polyphosphate/ATP-NAD kinase
PLM4_32_b1_sep16_scaffold_1107_27
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(24950..26845)
DNA (1896bp) protein (632aa)
1-deoxy-D-xylulose-5-phosphate synthase Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A483_GEMAT
1-deoxy-D-xylulose-5-phosphate synthase
Tax=GWC2_Gemmatimonadetes_71_10_curated
PLM4_32_b1_sep16_scaffold_1107_28
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(26866..27780)
DNA (915bp) protein (305aa)
Geranyltranstransferase Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A484_GEMAT
Polyprenyl synthetase
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
PLM4_32_b1_sep16_scaffold_1107_29
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(27962..28189)
DNA (228bp) protein (76aa)
xseB; exodeoxyribonuclease VII small subunit (EC:3.1.11.6)
Exodeoxyribonuclease 7 small subunit Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A485_GEMAT
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
PLM4_32_b1_sep16_scaffold_1107_30
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(28206..29393)
DNA (1188bp) protein (396aa)
xseA; exodeoxyribonuclease VII large subunit (EC:3.1.11.6)
Exodeoxyribonuclease 7 large subunit Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A486_GEMAT
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Displaying items 1-30 of 46 in total

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