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PLM4_32_b1_sep16_scaffold_1838

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Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_32_b1_sep16_scaffold_1838_1
unknown

Not on your lists

comp(3..245)
DNA (243bp) protein (81aa)

This feature has no annotations

PLM4_32_b1_sep16_scaffold_1838_2
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(257..802)
DNA (546bp) protein (182aa)
Uncharacterized protein Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5Y6_GEMAT
ATP/cobalamin adenosyltransferase
ATP/cobalamin adenosyltransferase {ECO:0000313|EMBL:AHG90070.1}; species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
PLM4_32_b1_sep16_scaffold_1838_3
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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921..1949
DNA (1029bp) protein (343aa)
Ferredoxin--NADP reductase Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5Y7_GEMAT
putative oxidoreductase
Tax=GWC2_Gemmatimonadetes_71_10_curated
PLM4_32_b1_sep16_scaffold_1838_4
Muricauda lutaonensis, Muricauda, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(1946..2374)
DNA (429bp) protein (143aa)
GCN5-related N-acetyltransferase Tax=Bacillus selenitireducens (strain ATCC 700615 / DSM 15326 / MLS10) RepID=D6XX90_BACIE
GCN5-related N-acetyltransferase {ECO:0000313|EMBL:AKA35288.1}; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Muricauda.;" source="Muricauda lutaonensis.;"
GCN5-like N-acetyltransferase
PLM4_32_b1_sep16_scaffold_1838_5
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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comp(2511..3980)
DNA (1470bp) protein (490aa)
D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase (EC:3.4.16.4)
peptidase S13 Tax=Micromonospora sp. CNB394 RepID=UPI0003656A55
Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
PLM4_32_b1_sep16_scaffold_1838_6
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

4132..6237
DNA (2106bp) protein (702aa)
Bacterial surface antigen (D15) family protein Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5Z0_GEMAT
surface antigen
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
PLM4_32_b1_sep16_scaffold_1838_7
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

6237..10430
DNA (4194bp) protein (1398aa)
Uncharacterized protein Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5Z1_GEMAT
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
PLM4_32_b1_sep16_scaffold_1838_8
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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10597..11502
DNA (906bp) protein (302aa)
hypothetical protein Tax=Actinomyces timonensis RepID=UPI000315EDC0
Conserved hypothetical protein CHP00147
Tax=RBG_16_Gemmatimonadetes_66_8_curated
PLM4_32_b1_sep16_scaffold_1838_9
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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11559..12902
DNA (1344bp) protein (448aa)
Two component, sigma54 specific, transcriptional regulator, Fis family bin=GWC2_Nitrospirae_57_13 species=Desulfuromonas acetoxidans genus=Desulfuromonas taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Nitrospirae_57_13 organism_group=Nitrospirae organism_desc=Same as C1_57_7 and D2_57_8
two component sigma54 specific Fis family transcriptional regulator
Tax=RBG_16_Gemmatimonadetes_66_8_curated
PLM4_32_b1_sep16_scaffold_1838_10
unknown

Not on your lists

comp(12899..13177)
DNA (279bp) protein (93aa)

This feature has no annotations

PLM4_32_b1_sep16_scaffold_1838_11
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

13371..13733
DNA (363bp) protein (121aa)
Uncharacterized protein Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5Z6_GEMAT
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
PLM4_32_b1_sep16_scaffold_1838_12
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

13820..14323
DNA (504bp) protein (168aa)
Uncharacterized protein Tax=Stigmatella aurantiaca (strain DW4/3-1) RepID=E3FEZ1_STIAD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHG90090.1}; species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
PLM4_32_b1_sep16_scaffold_1838_13
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

14320..15024
DNA (705bp) protein (235aa)
Tax=RBG_16_Gemmatimonadetes_66_8_curated
PLM4_32_b1_sep16_scaffold_1838_14
RLO_Elusimicrobia_59_9, Elusimicrobia, Bacteria

Not on your lists

15087..17201
DNA (2115bp) protein (705aa)
hypothetical protein Tax=Nitrospina sp. SCGC AAA288-L16 RepID=UPI00036B0155
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Elusimicrobia_59_9_curated
PLM4_32_b1_sep16_scaffold_1838_15
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(17204..18079)
DNA (876bp) protein (292aa)
lgt; prolipoprotein diacylglyceryl transferase (EC:2.4.99.-)
Prolipoprotein diacylglyceryl transferase Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A600_GEMAT
Tax=RBG_16_Gemmatimonadetes_66_8_curated
PLM4_32_b1_sep16_scaffold_1838_16
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists


comp(18076..19110)
DNA (1035bp) protein (345aa)
tRNA N6-adenosine threonylcarbamoyltransferase {ECO:0000256|HAMAP-Rule:MF_01445, ECO:0000256|SAAS:SAAS00018957}; EC=2.3.1.234 {ECO:0000256|HAMAP-Rule:MF_01445, ECO:0000256|SAAS:SAAS00182339};; N6-L-threonylcarbamoyladenine synthase {ECO:0000256|HAMAP-Rule:MF_01445}; t(6)A37 threonylcarbamoyladenosine biosynthesis protein TsaD {ECO:0000256|HAMAP-Rule:MF_01445}; tRNA threonylcarbamoyladenosine biosynthesis protein TsaD {ECO:0000256|HAMAP-Rule:MF_01445}; species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
tRNA N6-adenosine threonylcarbamoyltransferase Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=TSAD_GEMAT
O-sialoglycoprotein endopeptidase
PLM4_32_b1_sep16_scaffold_1838_17
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(19100..19660)
DNA (561bp) protein (187aa)
Thiol-disulfide oxidoreductase ResA Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A602_GEMAT
resA; thiol-disulfide oxidoreductase ResA
Tax=GWC2_Gemmatimonadetes_71_10_curated
PLM4_32_b1_sep16_scaffold_1838_18
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(19672..20310)
DNA (639bp) protein (213aa)
rpe; ribulose-5-phosphate 3-epimerase (EC:5.1.3.1)
Ribulose-phosphate 3-epimerase Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A603_GEMAT
Tax=RBG_16_Gemmatimonadetes_66_8_curated
PLM4_32_b1_sep16_scaffold_1838_19
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(20330..20716)
DNA (387bp) protein (129aa)
hypothetical protein Tax=Hydrogenedentes bacterium JGI 0000039-J10 RepID=UPI000373776F
serine/threonine-protein kinase
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Displaying 19 items

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