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PLM4_32_b1_sep16_scaffold_4237

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_32_b1_sep16_scaffold_4237_1
R_Acidobacteria_68_18, Acidobacteria, Bacteria

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comp(3..653)
DNA (651bp) protein (217aa)
Hydrogenase expression-formation protein HypD Tax=Halorhabdus tiamatea SARL4B RepID=F7PKP6_9EURY
[NiFe] hydrogenase metallocenter assembly protein HypD
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
PLM4_32_b1_sep16_scaffold_4237_2
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

comp(646..942)
DNA (297bp) protein (99aa)
Hydrogenase assembly chaperone hypC/hupF Tax=Anaeromyxobacter RepID=B4UBT6_ANASK
hydrogenase assembly chaperone HypC/HupF
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
PLM4_32_b1_sep16_scaffold_4237_3
Streptomyces xiamenensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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comp(946..2658)
DNA (1713bp) protein (571aa)
hypothetical protein Tax=Streptomyces sp. TOR3209 RepID=UPI000304EBD5
(NiFe) hydrogenase maturation protein HypF {ECO:0000313|EMBL:AKG46809.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces xiamenensis.;"
(NiFe) hydrogenase maturation protein HypF
PLM4_32_b1_sep16_scaffold_4237_4
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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comp(3109..3780)
DNA (672bp) protein (224aa)
Hydrogenase accessory protein HypB Tax=Dickeya zeae (strain Ech1591) RepID=C6CEH0_DICZE
hydrogenase accessory protein HypB
Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
PLM4_32_b1_sep16_scaffold_4237_5
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(3761..4021)
DNA (261bp) protein (87aa)
Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
PLM4_32_b1_sep16_scaffold_4237_6
Geobacter sp. OR-1, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(4014..4520)
DNA (507bp) protein (169aa)
Hydrogenase maturation protease Tax=Geobacter daltonii (strain DSM 22248 / JCM 15807 / FRC-32) RepID=B9M4L4_GEODF
Hydrogenase expression/formation protein HupD {ECO:0000313|EMBL:GAM08731.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter sp. OR-1.;"
hydrogenase maturation protease
PLM4_32_b1_sep16_scaffold_4237_7
Geobacter soli, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(4513..5259)
DNA (747bp) protein (249aa)
Ni/Fe-hydrogenase, b-type cytochrome subunit Tax=Geobacter sp. (strain M18) RepID=E8WNQ5_GEOS8
Iron hydrogenase {ECO:0000313|EMBL:KIE41571.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter soli.;"
Ni/Fe-hydrogenase, b-type cytochrome subunit
PLM4_32_b1_sep16_scaffold_4237_8
CG_Proteo_01, Proteobacteria, Bacteria

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comp(5256..6359)
DNA (1104bp) protein (368aa)
Nickel-dependent hydrogenase, large subunit bin=GWC2_Pelobacter_58_13 species=Geobacter uraniireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Pelobacter_58_13 organism_group=Deltaproteobacteria organism_desc=Good +
nickel-dependent hydrogenase large subunit
Tax=CG_Proteo_01
PLM4_32_b1_sep16_scaffold_4237_9
Mobiluncus curtisii, Mobiluncus, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6949..8109)
DNA (1161bp) protein (387aa)
hupA; hydrogenase (EC:1.12.99.6)
Uptake hydrogenase small subunit {ECO:0000313|EMBL:ADI67101.1}; EC=1.12.99.6 {ECO:0000313|EMBL:ADI67101.1};; species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Mobiluncus.;" source="Mobiluncus curtisii (strain ATCC 43063 / DSM 2711 / V125) (Falcivibrio; vaginalis).;"
Uptake hydrogenase small subunit Tax=Mobiluncus curtisii RepID=E6LX25_9ACTO
PLM4_32_b1_sep16_scaffold_4237_10
Oscillochloris trichoides, Oscillochloris, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

8373..9257
DNA (885bp) protein (295aa)
UspA domain-containing protein Tax=Oscillochloris trichoides DG-6 RepID=E1IE47_9CHLR
UspA domain-containing protein {ECO:0000313|EMBL:EFO80507.1}; species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Chloroflexineae; Oscillochloridaceae; Oscillochloris.;" source="Oscillochloris trichoides DG-6.;"
UspA domain-containing protein
PLM4_32_b1_sep16_scaffold_4237_11
Cyanobacterium stanieri, Cyanobacterium, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

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9254..9472
DNA (219bp) protein (73aa)
CBS domain containing membrane protein Tax=Cyanobacterium stanieri (strain ATCC 29140 / PCC 7202) RepID=K9YLX4_CYASC
hypothetical protein
CBS domain containing membrane protein {ECO:0000313|EMBL:AFZ47869.1}; species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Cyanobacterium.;" source="Cyanobacterium stanieri (strain ATCC 29140 / PCC 7202).;"
PLM4_32_b1_sep16_scaffold_4237_12
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

9608..10672
DNA (1065bp) protein (355aa)
metal-binding protein Tax=Thioalkalivibrio sp. ALJ17 RepID=UPI000367A718
CHAD domain containing protein
CHAD domain containing protein {ECO:0000313|EMBL:AHG91533.1}; species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
PLM4_32_b1_sep16_scaffold_4237_13
unknown

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10669..11022
DNA (354bp) protein (118aa)

This feature has no annotations

PLM4_32_b1_sep16_scaffold_4237_14
Anaeromyxobacter sp. PSR-1, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11754..12206
DNA (453bp) protein (151aa)
Uncharacterized protein Tax=Planctomyces maris DSM 8797 RepID=A6BYN9_9PLAN
Uncharacterized protein {ECO:0000313|EMBL:GAO04382.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.;" source="Anaeromyxobacter sp. PSR-1.;"
signal-transduction protein
PLM4_32_b1_sep16_scaffold_4237_15
CG_Delta_03, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12351..13514
DNA (1164bp) protein (388aa)
Peptidoglycan-binding domain 1 protein Tax=Marinobacter santoriniensis NKSG1 RepID=M7CRA2_9ALTE
ErfK/YbiS/YcfS/YnhG family protein
Tax=CG_Delta_03
PLM4_32_b1_sep16_scaffold_4237_16
unknown

Not on your lists

13514..14914
DNA (1401bp) protein (467aa)
protein-L-isoaspartate O-methyltransferase (EC:2.1.1.77)
UPI0003CEAE26 related cluster Tax=unknown RepID=UPI0003CEAE26
Uncharacterized protein {ECO:0000313|EMBL:CPR20202.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Filomicrobium.;" source="Filomicrobium sp. Y.;"
PLM4_32_b1_sep16_scaffold_4237_17
RLO_Gammaproteobacteria_47_11, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14871..15392
DNA (522bp) protein (174aa)
protein-L-isoaspartate O-methyltransferase (EC:2.1.1.77)
protein-L-isoaspartate O-methyltransferase Tax=Bradyrhizobium elkanii RepID=UPI0002EC3CF7
Tax=RifCSPlowO2_12_Gammaproteobacteria_47_11_curated
PLM4_32_b1_sep16_scaffold_4237_18
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(15489..15842)
DNA (354bp) protein (118aa)
UspA domain protein Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IM52_NATPD
UspA domain-containing protein
UspA domain-containing protein {ECO:0000313|EMBL:AHG92623.1}; species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
Displaying 18 items

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