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PLM4_32_b1_sep16_scaffold_2093

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_32_b1_sep16_scaffold_2093_1
R_Gammaproteobacteria_56_15, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2..328)
DNA (327bp) protein (109aa)
PDZ/DHR/GLGF domain protein Tax=Kribbella flavida (strain DSM 17836 / JCM 10339 / NBRC 14399) RepID=D2Q2I0_KRIFD
PDZ/DHR/GLGF domain-containing protein
Tax=RIFCSPLOWO2_02_FULL_Gammaproteobacteria_56_15_curated
PLM4_32_b1_sep16_scaffold_2093_2
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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comp(346..966)
DNA (621bp) protein (207aa)
Tax=GWC2_Gemmatimonadetes_71_10_curated
PLM4_32_b1_sep16_scaffold_2093_3
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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comp(963..1910)
DNA (948bp) protein (316aa)
hypothetical protein Tax=Pseudoxanthomonas sp. GW2 RepID=UPI0002EA04E0
ECF subfamily RNA polymerase sigma-24 subunit
Tax=GWC2_Gemmatimonadetes_71_10_curated
PLM4_32_b1_sep16_scaffold_2093_4
RBG_16_Acidobacteria_68_9_curated, Acidobacteria, Bacteria

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2023..2736
DNA (714bp) protein (238aa)
hypothetical protein bin=bin9_gal15 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Poribacteria tax=bin9_gal15 organism_group=GAL15
hypothetical protein
Tax=RBG_16_Acidobacteria_68_9_curated
PLM4_32_b1_sep16_scaffold_2093_5
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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2753..3598
DNA (846bp) protein (282aa)
Uncharacterized protein Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5F3_GEMAT
Uncharacterized protein {ECO:0000313|EMBL:EYF02302.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apiculatus DSM 436.;"
hypothetical protein
PLM4_32_b1_sep16_scaffold_2093_6
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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3693..4832
DNA (1140bp) protein (380aa)
Uncharacterized protein Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A796_GEMAT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHG92718.1}; species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
PLM4_32_b1_sep16_scaffold_2093_7
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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4847..5290
DNA (444bp) protein (148aa)
hypothetical protein Tax=Microchaete sp. PCC 7126 RepID=UPI000347C9F3
Cupin 2 conserved barrel domain protein
Cupin 2 conserved barrel domain protein {ECO:0000313|EMBL:AHG93030.1}; species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
PLM4_32_b1_sep16_scaffold_2093_8
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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5287..6051
DNA (765bp) protein (255aa)
Rhomboid family protein Tax=Chlorobium phaeobacteroides (strain BS1) RepID=B3EQD2_CHLPB
Peptidase S54, rhomboid domain protein
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
PLM4_32_b1_sep16_scaffold_2093_9
Amycolatopsis mediterranei, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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6073..6453
DNA (381bp) protein (127aa)
hypothetical protein Tax=Zavarzinella formosa RepID=UPI0003703F6C
glyoxalase/bleomycin resistance protein/dioxygenase
Glyoxalase/bleomycin resistance protein/dioxygenase {ECO:0000313|EMBL:AEK44745.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis mediterranei (strain S699) (Nocardia mediterranei).;"
PLM4_32_b1_sep16_scaffold_2093_10
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

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comp(6450..7379)
DNA (930bp) protein (310aa)
thiosulfate sulfurtransferase (EC:2.8.1.1)
Thiosulfate sulfurtransferase Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01SE5_SOLUE
Sulfurtransferase {ECO:0000256|RuleBase:RU000507}; Flags: Precursor;; species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatus (strain Ellin6076).;"
PLM4_32_b1_sep16_scaffold_2093_11
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(7388..8278)
DNA (891bp) protein (297aa)
hypothetical protein Tax=Acidobacteriaceae bacterium KBS 89 RepID=UPI00036DF0CB
Rhodanese-like protein
Sulfurtransferase {ECO:0000256|RuleBase:RU000507}; species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
PLM4_32_b1_sep16_scaffold_2093_12
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(8281..9177)
DNA (897bp) protein (299aa)
Thiosulfate sulfurtransferase Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01SE5_SOLUE
Rhodanese-like protein
Sulfurtransferase {ECO:0000256|RuleBase:RU000507}; species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
PLM4_32_b1_sep16_scaffold_2093_13
Corallococcus coralloides, Corallococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(9312..10055)
DNA (744bp) protein (248aa)
LyTR family two component transcriptional regulator Tax=Corallococcus coralloides (strain ATCC 25202 / DSM 2259 / NBRC 100086 / M2) RepID=H8N1K2_CORCM
lytT; LyTR family two component transcriptional regulator
LyTR family two component transcriptional regulator {ECO:0000313|EMBL:AFE09285.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Corallococcus.;" source="Corallococcus coralloides (strain ATCC 25202 / DSM 2259 / NBRC 100086; / M2) (Myxococcus coralloides).;"
PLM4_32_b1_sep16_scaffold_2093_14
Myxococcus stipitatus, Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10052..11158)
DNA (1107bp) protein (369aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source="Myxococcus stipitatus (strain DSM 14675 / JCM 12634 / Mx s8).;"
Signal transduction histidine kinase LytS Tax=Myxococcus stipitatus (strain DSM 14675 / JCM 12634 / Mx s8) RepID=L7UG18_MYXSD
signal transduction histidine kinase LytS
PLM4_32_b1_sep16_scaffold_2093_15

Not on your lists

11704..12057
DNA (354bp) protein (118aa)
K03832 periplasmic protein TonB Tax=Halomonas elongata (strain ATCC 33173 / DSM 2581 / NBRC 15536 / NCIMB 2198 / 1H9) RepID=E1V4I3_HALED
Uncharacterized protein {ECO:0000313|EMBL:KKM06684.1}; Flags: Fragment;; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
TonB family protein
PLM4_32_b1_sep16_scaffold_2093_16
GWF2_Bacteroidetes_38_335_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(12128..13651)
DNA (1524bp) protein (508aa)
hypothetical protein Tax=Zavarzinella formosa RepID=UPI00031043A6
hypothetical protein
Tax=GWF2_Bacteroidetes_38_335_curated
PLM4_32_b1_sep16_scaffold_2093_17
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

13699..16104
DNA (2406bp) protein (802aa)
penicillin amidase (EC:3.5.1.11)
Penicillin amidase {ECO:0000313|EMBL:ABJ86920.1}; EC=3.5.1.11 {ECO:0000313|EMBL:ABJ86920.1};; Flags: Precursor;; species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatus (strain Ellin6076).;"
Penicillin amidase Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01TV0_SOLUE
PLM4_32_b1_sep16_scaffold_2093_18
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(16106..17185)
DNA (1080bp) protein (360aa)
Aminopeptidase Tax=Sorangium cellulosum (strain So ce56) RepID=A9FYC1_SORC5
peptidase S58 DmpA
Peptidase S58 DmpA {ECO:0000313|EMBL:AHG89200.1}; species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
Displaying 18 items

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