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PLM4_32_b1_sep16_scaffold_650

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Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_32_b1_sep16_scaffold_650_1

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comp(3..779)
DNA (777bp) protein (259aa)
Aromatic-L-amino-acid decarboxylase Tax=Dethiobacter alkaliphilus AHT 1 RepID=C0GK43_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KKN43772.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
PLP-dependent enzyme, glutamate decarboxylase
PLM4_32_b1_sep16_scaffold_650_2
Burkholderiaceae bacterium 16, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(769..1551)
DNA (783bp) protein (261aa)
Patatin Tax=Cupriavidus sp. HPC(L) RepID=V2JHG9_9BURK
Patatin {ECO:0000313|EMBL:KJK16569.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae.;" source="Burkholderiaceae bacterium 16.;"
hypothetical protein
PLM4_32_b1_sep16_scaffold_650_3
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

1566..2255
DNA (690bp) protein (230aa)
DNA-3-methyladenine glycosylase II bin=GWC2_Methylomirabilis_70_16 species=Cystobacter fuscus genus=Cystobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
hypothetical protein
Tax=GWC2_Rokubacteria_70_16_curated
PLM4_32_b1_sep16_scaffold_650_4
Myxococcus xanthus, Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(2113..4245)
DNA (2133bp) protein (711aa)
Putative transporter Tax=Myxococcus xanthus (strain DK 1622) RepID=Q1CXH1_MYXXD
transporter
Putative transporter {ECO:0000313|EMBL:ABF90545.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source="Myxococcus xanthus (strain DK 1622).;"
PLM4_32_b1_sep16_scaffold_650_5
Syntrophus aciditrophicus, Syntrophus, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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4380..4760
DNA (381bp) protein (127aa)
Response regulator receiver domain Tax=Syntrophus aciditrophicus (strain SB) RepID=Q2LQ08_SYNAS
response regulator receiver domain-containing protein
Response regulator receiver domain {ECO:0000313|EMBL:ABC75947.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Syntrophobacterales; Syntrophaceae; Syntrophus.;" source="Syntrophus aciditrophicus (strain SB).;"
PLM4_32_b1_sep16_scaffold_650_trna_2
unknown

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comp(4871..4943)
DNA (73bp)
transferRNA Asn
PLM4_32_b1_sep16_scaffold_650_6
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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5300..6355
DNA (1056bp) protein (352aa)
DNA polymerase III delta' subunit Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A9U0_GEMAT
DNA polymerase III delta' subunit
Tax=RBG_16_Gemmatimonadetes_66_8_curated
PLM4_32_b1_sep16_scaffold_650_7
Rhizobium sp. R1-200B4, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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6352..6837
DNA (486bp) protein (162aa)
molybdenum cofactor biosynthesis protein MoaC Tax=Paracoccus sp. N5 RepID=UPI00036ECACB
Cyclic pyranopterin monophosphate synthase accessory protein {ECO:0000256|HAMAP-Rule:MF_01224}; Molybdenum cofactor biosynthesis protein C {ECO:0000256|HAMAP-Rule:MF_01224}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. R1-200B4.;"
moaC; molybdenum cofactor biosynthesis protein C
PLM4_32_b1_sep16_scaffold_650_8
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

6849..7538
DNA (690bp) protein (230aa)
Uncharacterized protein Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A9U2_GEMAT
Lytic transglycosylase catalytic
Tax=RBG_16_Gemmatimonadetes_66_8_curated
PLM4_32_b1_sep16_scaffold_650_9
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(7522..9315)
DNA (1794bp) protein (598aa)
Putative transglycosylase Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A9U3_GEMAT
putative transglycosylase
Tax=RBG_16_Gemmatimonadetes_66_8_curated
PLM4_32_b1_sep16_scaffold_650_10
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(9433..9834)
DNA (402bp) protein (134aa)
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
PLM4_32_b1_sep16_scaffold_650_11
Hyalangium minutum, Hyalangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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9856..10740
DNA (885bp) protein (295aa)
Beta-lactamase Tax=Stigmatella aurantiaca (strain DW4/3-1) RepID=E3FNK7_STIAD
Beta-lactamase {ECO:0000313|EMBL:KFE68341.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Hyalangium.;" source="Hyalangium minutum.;"
beta-lactamase
PLM4_32_b1_sep16_scaffold_650_12
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(10831..11685)
DNA (855bp) protein (285aa)
Branched-chain amino acid aminotransferase Tax=Heliobacterium modesticaldum (strain ATCC 51547 / Ice1) RepID=B0TCQ6_HELMI
ilvE; branched-chain amino acid aminotransferase
Tax=GWC2_Gemmatimonadetes_71_10_curated
PLM4_32_b1_sep16_scaffold_650_13
Haliangium ochraceum, Haliangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11780..12262
DNA (483bp) protein (161aa)
Phosphohistidine phosphatase, SixA Tax=Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2) RepID=D0LW60_HALO1
phosphohistidine phosphatase SixA
Phosphohistidine phosphatase, SixA {ECO:0000313|EMBL:ACY15992.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Nannocystineae; Kofleriaceae; Haliangium.;" source="Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2).;"
PLM4_32_b1_sep16_scaffold_650_trna_1
unknown

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comp(12334..12406)
DNA (73bp)
transferRNA Lys
PLM4_32_b1_sep16_scaffold_650_14
Nitrolancea hollandica, Nitrolancea, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists

comp(12410..13078)
DNA (669bp) protein (223aa)
Ribonuclease HII {ECO:0000256|HAMAP-Rule:MF_00052, ECO:0000256|SAAS:SAAS00016879}; Short=RNase HII {ECO:0000256|HAMAP-Rule:MF_00052};; EC=3.1.26.4 {ECO:0000256|HAMAP-Rule:MF_00052, ECO:0000256|SAAS:SAAS00016872};; species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Nitrolancea.;" source="Nitrolancea hollandica Lb.;"
Ribonuclease H (EC:3.1.26.4)
Ribonuclease HII Tax=Nitrolancetus hollandicus Lb RepID=I4EGJ7_9CHLR
PLM4_32_b1_sep16_scaffold_650_15
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists


comp(13095..13442)
DNA (348bp) protein (116aa)
50S ribosomal protein L19 Tax=Kyrpidia tusciae (strain DSM 2912 / NBRC 15312 / T2) RepID=D5WPA9_KYRT2
50S ribosomal protein L19
Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
PLM4_32_b1_sep16_scaffold_650_16
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(13414..14139)
DNA (726bp) protein (242aa)
tRNA (guanine-N(1)-)-methyltransferase Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AAW8_GEMAT
tRNA (guanine-N(1)-)-methyltransferase
Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
PLM4_32_b1_sep16_scaffold_650_17
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(14213..14746)
DNA (534bp) protein (178aa)
Ribosome maturation factor RimM Tax=Desmospora sp. 8437 RepID=F5SCP8_9BACL
rimM; 16S rRNA processing protein RimM
Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
PLM4_32_b1_sep16_scaffold_650_18
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists


comp(14747..15010)
DNA (264bp) protein (88aa)
30S ribosomal protein S16 Tax=Synergistes sp. 3_1_syn1 RepID=G9PS60_9BACT
SSU ribosomal protein S16P
Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
PLM4_32_b1_sep16_scaffold_650_19
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(15032..16318)
DNA (1287bp) protein (429aa)
Signal recognition particle protein Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AAY3_GEMAT
Signal recognition 54 kDa protein
Signal recognition particle protein {ECO:0000256|HAMAP-Rule:MF_00306}; Fifty-four homolog {ECO:0000256|HAMAP-Rule:MF_00306}; species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
PLM4_32_b1_sep16_scaffold_650_20
unknown

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comp(16521..16955)
DNA (435bp) protein (145aa)

This feature has no annotations

PLM4_32_b1_sep16_scaffold_650_21
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(16970..17806)
DNA (837bp) protein (279aa)
Uncharacterized protein Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AE77_GEMAT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAH40804.1}; species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC; 100505).;"
PLM4_32_b1_sep16_scaffold_650_22
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

18242..18817
DNA (576bp) protein (192aa)
RNA polymerase sigma 70 Tax=Salisaeta longa RepID=UPI0003B6720F
RNA polymerase sigma factor
RNA polymerase sigma factor {ECO:0000313|EMBL:AHG88776.1}; species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
PLM4_32_b1_sep16_scaffold_650_23
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

18833..21061
DNA (2229bp) protein (743aa)
serine/threonine protein kinase Tax=Salisaeta longa RepID=UPI0003B639AE
protein kinase
Protein kinase {ECO:0000313|EMBL:AHG88165.1}; species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
PLM4_32_b1_sep16_scaffold_650_24
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

21019..22143
DNA (1125bp) protein (375aa)
Hypothetical membrane protein Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AE80_GEMAT
transcriptional activator domain-containing protein
Transcriptional activator domain-containing protein {ECO:0000313|EMBL:AHG91848.1}; species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
PLM4_32_b1_sep16_scaffold_650_25
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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comp(22082..22225)
DNA (144bp) protein (48aa)
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Displaying 27 items

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