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PLM4_32_b1_sep16_scaffold_3297

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_32_b1_sep16_scaffold_3297_1
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(2..451)
DNA (450bp) protein (150aa)
putative ornithine cyclodeaminase, mu-crystallin (EC:4.3.1.12)
Putative ornithine cyclodeaminase, mu-crystallin Tax=Natronococcus occultus SP4 RepID=L0K4Q6_9EURY
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
PLM4_32_b1_sep16_scaffold_3297_2
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(589..1269)
DNA (681bp) protein (227aa)
Polar amino acid ABC transporter, inner membrane subunit bin=GWF2_Methylomirabilis_70_14 species=Desulfohalobium retbaense genus=Desulfohalobium taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
gltK1; protein GltK1
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
PLM4_32_b1_sep16_scaffold_3297_3
RLO_Deltaproteobacteria_60_16, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(1272..1997)
DNA (726bp) protein (242aa)
GltJ1 bin=GWA2_Methylomirabilis_73_35 species=Desulfobacterium autotrophicum genus=Desulfobacterium taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
polar amino acid ABC transporter inner membrane subunit
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_16_curated
PLM4_32_b1_sep16_scaffold_3297_4
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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comp(2113..2970)
DNA (858bp) protein (286aa)
gltB1; protein GltB1 (EC:1.4.1.13)
GltB1 bin=GWF2_Methylomirabilis_70_14 species=Desulfobacterium autotrophicum genus=Desulfobacterium taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM4_32_b1_sep16_scaffold_3297_5
R_Rokubacteria_69_13, Rokubacteria, Bacteria

Not on your lists

comp(2981..3709)
DNA (729bp) protein (243aa)
Phosphate-transporting ATPase bin=bin7_NC10_sister species=Desulfovibrio africanus genus=Desulfovibrio taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
ABC transporter
Tax=RIFCSPHIGHO2_02_FULL_Rokubacteria_69_13_curated
PLM4_32_b1_sep16_scaffold_3297_6
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

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4005..4367
DNA (363bp) protein (121aa)
Uncharacterized protein Tax=Candidatus Methylomirabilis oxyfera RepID=D5MIA4_9BACT
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM4_32_b1_sep16_scaffold_3297_7
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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4444..5730
DNA (1287bp) protein (429aa)
gltA; citrate synthase (EC:2.3.3.1) bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin3_NC10 organism_group=NC10
citrate synthase I (EC:2.3.3.1)
Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
PLM4_32_b1_sep16_scaffold_3297_8
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5746..6393)
DNA (648bp) protein (216aa)
Transglycosylase, Slt family bin=GWF2_Nitrospirae_44_13 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
membrane-bound lytic murein transglycosylase D
Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
Displaying 8 items

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