ggKbase home page

PLM4_32_b1_sep16_scaffold_37344

Search features with annotation key words

Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_32_b1_sep16_scaffold_37344_1
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..935)
DNA (933bp) protein (311aa)
queuine tRNA-ribosyltransferase (EC:2.4.2.29)
Queuine tRNA-ribosyltransferase bin=GWD2_Deltaproteobacteria_55_8 species=Desulfurobacterium thermolithotrophum genus=Desulfurobacterium taxon_order=Aquificales taxon_class=Aquificae phylum=Aquificae tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM4_32_b1_sep16_scaffold_37344_2
RLO_Deltaproteobacteria_60_16, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1007..2053)
DNA (1047bp) protein (349aa)
S-adenosylmethionine:tRNAribosyltransferase-isomerase; K07568 S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:5.-.-.-] bin=bin3_NC10 species=Desulfurobacterium thermolithotrophum genus=Desulfurobacterium taxon_order=Aquificales taxon_class=Aquificae phylum=Aquificae tax=bin3_NC10 organism_group=NC10
queA; S-adenosylmethionine--tRNA ribosyltransferase-isomerase
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_16_curated
PLM4_32_b1_sep16_scaffold_37344_3
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2199..2957)
DNA (759bp) protein (253aa)
Membrane protease subunit, stomatin/prohibitin Tax=Desulfomonile tiedjei (strain ATCC 49306 / DSM 6799 / DCB-1) RepID=I4C2N5_DESTA
membrane protease subunit, stomatin/prohibitin
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
PLM4_32_b1_sep16_scaffold_37344_4
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2977..3462)
DNA (486bp) protein (162aa)
Nodulation efficiency protein NfeD Tax=Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB) RepID=A0LFG3_SYNFM
hypothetical protein
Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
PLM4_32_b1_sep16_scaffold_37344_5
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3459..4190)
DNA (732bp) protein (244aa)
Nodulation efficiency protein NfeD bin=GWD2_Deltaproteobacteria_55_8 species=Syntrophobacter fumaroxidans genus=Syntrophobacter taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
membrane-bound serine protease (ClpP class)
Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
PLM4_32_b1_sep16_scaffold_37344_6
GWD2_Deltaproteobacteria_55_8_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4177..4809)
DNA (633bp) protein (211aa)
Phage SPO1 DNA polymerase-related protein bin=GWD2_Deltaproteobacteria_55_8 species=Anaeromyxobacter dehalogenans genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
phage SPO1 DNA polymerase-like protein
Tax=GWD2_Deltaproteobacteria_55_8_curated
PLM4_32_b1_sep16_scaffold_37344_7
GWD2_Deltaproteobacteria_55_8_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4769..5008)
DNA (240bp) protein (80aa)
Phage SPO1 DNA polymerase-related protein bin=GWD2_Deltaproteobacteria_55_8 species=Anaeromyxobacter dehalogenans genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
Tax=GWD2_Deltaproteobacteria_55_8_curated
PLM4_32_b1_sep16_scaffold_37344_8
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5100..5594)
DNA (495bp) protein (165aa)
Putative uncharacterized protein bin=GWD2_Deltaproteobacteria_55_8 species=delta proteobacterium NaphS2 genus=unknown taxon_order=unknown taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
GTP-binding protein
Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
Displaying 8 items

View Taxonomy