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PLM4_32_b1_sep16_scaffold_1863

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_32_b1_sep16_scaffold_1863_1
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

3..656
DNA (654bp) protein (218aa)
glgC; nucleotidyl transferase (EC:2.7.7.13)
nucleotidyl transferase bin=CNBR_ACIDO species=Anaeromyxobacter dehalogenans genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
PLM4_32_b1_sep16_scaffold_1863_2
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

656..1639
DNA (984bp) protein (328aa)
aminoglycoside phosphotransferase bin=CNBR_ACIDO species=Desulfomonile tiedjei genus=Desulfomonile taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
aminoglycoside phosphotransferase
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
PLM4_32_b1_sep16_scaffold_1863_3
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

1668..2534
DNA (867bp) protein (289aa)
Xylose isomerase-like TIM barrel Tax=mine drainage metagenome RepID=E6PXB5_9ZZZZ
xylose isomerase
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
PLM4_32_b1_sep16_scaffold_1863_4
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

2589..3881
DNA (1293bp) protein (431aa)
asparaginyl-tRNA synthetase (EC:6.1.1.22); K01893 asparaginyl-tRNA synthetase [EC:6.1.1.22] bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
asparaginyl-tRNA synthetase (EC:6.1.1.22)
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
PLM4_32_b1_sep16_scaffold_1863_5
RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated, Acidobacteria, Bacteria

Not on your lists

3907..4545
DNA (639bp) protein (213aa)
30S ribosomal protein S12P methylthiotransferase; K14441 ribosomal protein S12 methylthiotransferase [EC:2.-.-.-] bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
30S ribosomal protein S12P methylthiotransferase
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated
PLM4_32_b1_sep16_scaffold_1863_6
RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated, Acidobacteria, Bacteria

Not on your lists

4542..5306
DNA (765bp) protein (255aa)
30S ribosomal protein S12P methylthiotransferase; K14441 ribosomal protein S12 methylthiotransferase [EC:2.-.-.-] bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated
PLM4_32_b1_sep16_scaffold_1863_7
RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated, Acidobacteria, Bacteria

Not on your lists

5425..5901
DNA (477bp) protein (159aa)
hypothetical protein; K09748 ribosome maturation factor RimP bin=CNBR_ACIDO species=unknown genus=Thermotoga taxon_order=Thermotogales taxon_class=Thermotogae phylum=Thermotogae tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated
PLM4_32_b1_sep16_scaffold_1863_8
RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated, Acidobacteria, Bacteria

Not on your lists

5901..7076
DNA (1176bp) protein (392aa)
NusA antitermination factor; K02600 N utilization substance protein A bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
NusA antitermination factor
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated
PLM4_32_b1_sep16_scaffold_1863_9
RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated, Acidobacteria, Bacteria

Not on your lists

7124..9838
DNA (2715bp) protein (905aa)
translation initiation factor 2; K02519 translation initiation factor IF-2 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
translation initiation factor 2
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated
PLM4_32_b1_sep16_scaffold_1863_10
RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated, Acidobacteria, Bacteria

Not on your lists

9854..10267
DNA (414bp) protein (138aa)
rbfA; ribosome-binding factor A; K02834 ribosome-binding factor A bin=CNBR_ACIDO species=Pelobacter carbinolicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
rbfA; ribosome-binding factor A
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated
PLM4_32_b1_sep16_scaffold_1863_11
RifOxyA12_full_Lentisphaerae_48_11_curated, Lentisphaerae, Bacteria

Not on your lists

10305..10841
DNA (537bp) protein (179aa)
Exonuclease RNase T and DNA polymerase III Tax=Desulfatibacillum alkenivorans (strain AK-01) RepID=B8FMQ5_DESAA
exonuclease RNase T and DNA polymerase III
Tax=RifOxyA12_full_Lentisphaerae_48_11_curated
PLM4_32_b1_sep16_scaffold_1863_12
RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated, Acidobacteria, Bacteria

Not on your lists

10910..11809
DNA (900bp) protein (300aa)
tRNA pseudouridine synthase B Tax=Cystobacter fuscus DSM 2262 RepID=S9R1U1_9DELT
tRNA pseudouridine synthase B
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated
PLM4_32_b1_sep16_scaffold_1863_13
RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated, Acidobacteria, Bacteria

Not on your lists


11902..12171
DNA (270bp) protein (90aa)
rpsO; 30S ribosomal protein S15; K02956 small subunit ribosomal protein S15 bin=CNBR_ACIDO species=Cystobacter fuscus genus=Cystobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
rpsO; 30S ribosomal protein S15
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated
PLM4_32_b1_sep16_scaffold_1863_14
RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated, Acidobacteria, Bacteria

Not on your lists

12205..12852
DNA (648bp) protein (216aa)
polynucleotide phosphorylase/polyadenylase; K00962 polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
polynucleotide phosphorylase
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated
Displaying 14 items

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