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PLM4_32_b1_sep16_scaffold_25126

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_32_b1_sep16_scaffold_25126_1
RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated, Acidobacteria, Bacteria

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comp(19..309)
DNA (291bp) protein (97aa)
50S ribosomal protein L25; K02892 large subunit ribosomal protein L23 bin=CNBR_ACIDO species=Terriglobus saanensis genus=Terriglobus taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
rplW; 50S ribosomal protein L23
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated
PLM4_32_b1_sep16_scaffold_25126_2
RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated, Acidobacteria, Bacteria

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comp(312..935)
DNA (624bp) protein (208aa)
rplD; 50S ribosomal protein L4; K02926 large subunit ribosomal protein L4 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
rplD; 50S ribosomal protein L4
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated
PLM4_32_b1_sep16_scaffold_25126_3
RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated, Acidobacteria, Bacteria

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comp(951..1646)
DNA (696bp) protein (232aa)
50S ribosomal protein L3P; K02906 large subunit ribosomal protein L3 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
50S ribosomal protein L3P
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated
PLM4_32_b1_sep16_scaffold_25126_4
RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated, Acidobacteria, Bacteria

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comp(1650..1979)
DNA (330bp) protein (110aa)
rpsJ; 30S ribosomal protein S10; K02946 small subunit ribosomal protein S10 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
rpsJ; 30S ribosomal protein S10
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated
PLM4_32_b1_sep16_scaffold_25126_5
RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated, Acidobacteria, Bacteria

Not on your lists

comp(1949..4096)
DNA (2148bp) protein (716aa)
fusA-3; translation elongation factor G; K02355 elongation factor G bin=CNBR_ACIDO species=Geobacter sulfurreducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
fusA; elongation factor G
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated
PLM4_32_b1_sep16_scaffold_25126_6
RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated, Acidobacteria, Bacteria

Not on your lists


comp(4136..4609)
DNA (474bp) protein (158aa)
30S ribosomal protein S7; K02992 small subunit ribosomal protein S7 bin=CNBR_ACIDO species=Staphylococcus saprophyticus genus=Staphylococcus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
SSU ribosomal protein S7p (S5e)
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated
PLM4_32_b1_sep16_scaffold_25126_7
RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated, Acidobacteria, Bacteria

Not on your lists


comp(4631..5005)
DNA (375bp) protein (125aa)
rpsL; 30S ribosomal protein S12; K02950 small subunit ribosomal protein S12 bin=CNBR_ACIDO species=Syntrophobacter fumaroxidans genus=Syntrophobacter taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
30S ribosomal protein S12
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated
PLM4_32_b1_sep16_scaffold_25126_8
RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated, Acidobacteria, Bacteria

Not on your lists

5345..5746
DNA (402bp) protein (134aa)
Putative uncharacterized protein Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01WG0_SOLUE
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated
PLM4_32_b1_sep16_scaffold_25126_9
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

5782..6627
DNA (846bp) protein (282aa)
Uncharacterized protein Tax=Pedosphaera parvula Ellin514 RepID=B9XS66_9BACT
LPXTG-motif cell wall anchor domain-containing protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
Displaying 9 items

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