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PLM4_32_b1_sep16_scaffold_6284

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Displaying 7 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_32_b1_sep16_scaffold_6284_1
unknown

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comp(3..197)
DNA (195bp) protein (65aa)

This feature has no annotations

PLM4_32_b1_sep16_scaffold_6284_2
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

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comp(160..1125)
DNA (966bp) protein (322aa)
Threonine dehydratase Tax=uncultured marine crenarchaeote E48-1C RepID=G9BAV2_9CREN
threonine dehydratase
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
PLM4_32_b1_sep16_scaffold_6284_3
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

1154..1816
DNA (663bp) protein (221aa)
beta-lactamase bin=CNBR_ACIDO species=Desulfuromonas acetoxidans genus=Desulfuromonas taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
beta-lactamase domain-containing protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
PLM4_32_b1_sep16_scaffold_6284_4
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

comp(1817..2515)
DNA (699bp) protein (233aa)
3-oxoacyl-ACP reductase (EC:1.1.1.100)
3-oxoacyl-(Acyl-carrier-protein) reductase Tax=Deinococcus maricopensis (strain DSM 21211 / LMG 22137 / NRRL B-23946 / LB-34) RepID=E8U7Y8_DEIML
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
PLM4_32_b1_sep16_scaffold_6284_5
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

2545..3381
DNA (837bp) protein (279aa)
malate dehydrogenase (EC:1.1.1.37); K00024 malate dehydrogenase [EC:1.1.1.37] bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
mdh; malate dehydrogenase (EC:1.1.1.37)
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
PLM4_32_b1_sep16_scaffold_6284_6
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(3368..3982)
DNA (615bp) protein (205aa)
ECF subfamily RNA polymerase sigma factor bin=GWC2_Methylomirabilis_70_24 species=Nitrospina gracilis genus=Nitrospina taxon_order=Nitrospinales taxon_class=Nitrospinia phylum=Nitrospinae tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
putative RNA polymerase ECF-type sigma factor
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
PLM4_32_b1_sep16_scaffold_6284_7
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

comp(4071..5837)
DNA (1767bp) protein (589aa)
2-oxoglutarate dehydrogenase E2 component Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IIF0_KORVE
2-oxoglutarate dehydrogenase E2
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
Displaying 7 items

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