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PLM4_65_coex_sep16_scaffold_10

Search features with annotation key words

Displaying items 1-30 of 201 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_coex_sep16_scaffold_10_1
unknown

Not on your lists

3..104
DNA (102bp) protein (34aa)

This feature has no annotations

PLM4_65_coex_sep16_scaffold_10_2
R_Deltaproteobacteria_44_9, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

159..449
DNA (291bp) protein (97aa)
Putative uncharacterized protein bin=GWF2_Planctomycetes_50_10 species=Desulfobacterium autotrophicum genus=Desulfobacterium taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Planctomycetes_50_10 organism_group=Planctomycetes
hypothetical protein
Tax=RIFCSPLOWO2_02_Deltaproteobacteria_44_9_curated
PLM4_65_coex_sep16_scaffold_10_3
RBG_13_Planctomycetes_50_24_curated, Physcisphaerae, Planctomycetes, Bacteria

Not on your lists

446..1504
DNA (1059bp) protein (353aa)
gpsA; NAD(P)H-dependent glycerol-3-phosphate dehydrogenase (EC:1.1.1.94)
Glycerol-3-phosphate dehydrogenase [NAD(P)+] bin=GWF2_Planctomycetes_50_10 species=Phycisphaera mikurensis genus=Phycisphaera taxon_order=Phycisphaerales taxon_class=Phycisphaerae phylum=Planctomycetes tax=GWF2_Planctomycetes_50_10 organism_group=Planctomycetes
Tax=RBG_13_Planctomycetes_50_24_curated
PLM4_65_coex_sep16_scaffold_10_4
RBG_16_Planctomycetes_55_9_curated, Phycisphaerae, Planctomycetes, Bacteria

Not on your lists

1898..2872
DNA (975bp) protein (325aa)
id=3865377 bin=GWF2_Planctomycetes_50_10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Planctomycetes_50_10 organism_group=Planctomycetes
Tax=RBG_16_Planctomycetes_55_9_curated
PLM4_65_coex_sep16_scaffold_10_5
RBG_13_Planctomycetes_50_24_curated, Physcisphaerae, Planctomycetes, Bacteria

Not on your lists

2931..3662
DNA (732bp) protein (244aa)
Uncharacterized protein bin=GWF2_Planctomycetes_50_10 species=Phycisphaera mikurensis genus=Phycisphaera taxon_order=Phycisphaerales taxon_class=Phycisphaerae phylum=Planctomycetes tax=GWF2_Planctomycetes_50_10 organism_group=Planctomycetes
hypothetical protein
Tax=RBG_13_Planctomycetes_50_24_curated
PLM4_65_coex_sep16_scaffold_10_6
RBG_13_Planctomycetes_50_24_curated, Physcisphaerae, Planctomycetes, Bacteria

Not on your lists

3738..4274
DNA (537bp) protein (179aa)
Uncharacterized protein bin=GWF2_Planctomycetes_50_10 species=Phycisphaera mikurensis genus=Phycisphaera taxon_order=Phycisphaerales taxon_class=Phycisphaerae phylum=Planctomycetes tax=GWF2_Planctomycetes_50_10 organism_group=Planctomycetes
Tfp pilus assembly protein PilO
Tax=RBG_13_Planctomycetes_50_24_curated
PLM4_65_coex_sep16_scaffold_10_7
RBG_16_Planctomycetes_55_9_curated, Phycisphaerae, Planctomycetes, Bacteria

Not on your lists

4322..5044
DNA (723bp) protein (241aa)
id=3865372 bin=GWF2_Planctomycetes_50_10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Planctomycetes_50_10 organism_group=Planctomycetes
Tax=RBG_16_Planctomycetes_55_9_curated
PLM4_65_coex_sep16_scaffold_10_8
RBG_13_Planctomycetes_50_24_curated, Physcisphaerae, Planctomycetes, Bacteria

Not on your lists

5099..6217
DNA (1119bp) protein (373aa)
Twitching motility protein bin=GWF2_Planctomycetes_50_10 species=Phycisphaera mikurensis genus=Phycisphaera taxon_order=Phycisphaerales taxon_class=Phycisphaerae phylum=Planctomycetes tax=GWF2_Planctomycetes_50_10 organism_group=Planctomycetes
pilT; twitching motility protein
Tax=RBG_13_Planctomycetes_50_24_curated
PLM4_65_coex_sep16_scaffold_10_9
RBG_13_Planctomycetes_50_24_curated, Physcisphaerae, Planctomycetes, Bacteria

Not on your lists

6311..7534
DNA (1224bp) protein (408aa)
Type IV pilus assembly protein PilC bin=GWF2_Planctomycetes_50_10 species=Phycisphaera mikurensis genus=Phycisphaera taxon_order=Phycisphaerales taxon_class=Phycisphaerae phylum=Planctomycetes tax=GWF2_Planctomycetes_50_10 organism_group=Planctomycetes
pilC; type IV pilus assembly protein PilC
Tax=RBG_13_Planctomycetes_50_24_curated
PLM4_65_coex_sep16_scaffold_10_10
RBG_13_Planctomycetes_50_24_curated, Physcisphaerae, Planctomycetes, Bacteria

Not on your lists

7600..8091
DNA (492bp) protein (164aa)
Uncharacterized protein bin=GWF2_Planctomycetes_50_10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Planctomycetes_50_10 organism_group=Planctomycetes
Tax=RBG_13_Planctomycetes_50_24_curated
PLM4_65_coex_sep16_scaffold_10_11
RBG_13_Planctomycetes_50_24_curated, Physcisphaerae, Planctomycetes, Bacteria

Not on your lists

8143..8640
DNA (498bp) protein (166aa)
Putative uncharacterized protein bin=GWF2_Planctomycetes_50_10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Planctomycetes_50_10 organism_group=Planctomycetes
Tax=RBG_13_Planctomycetes_50_24_curated
PLM4_65_coex_sep16_scaffold_10_trna_1
unknown

Not on your lists

8704..8777
DNA (74bp)
transferRNA Val
PLM4_65_coex_sep16_scaffold_10_12
RBG_13_Planctomycetes_60_9_curated, Phycisphaerae, Planctomycetes, Bacteria

Not on your lists

comp(8710..10017)
DNA (1308bp) protein (436aa)
Integrase bin=GWC2_Planctomycetes_45_44 species=Planctomyces maris genus=Planctomyces taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWC2_Planctomycetes_45_44 organism_group=Planctomycetes organism_desc=Novel; good
integrase family protein
Tax=RBG_13_Planctomycetes_60_9_curated
PLM4_65_coex_sep16_scaffold_10_13
Planctopirus limnophila, Planctopirus, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(10240..10443)
DNA (204bp) protein (68aa)
Uncharacterized protein Tax=Planctomyces limnophilus (strain ATCC 43296 / DSM 3776 / IFAM 1008 / 290) RepID=D5SUK7_PLAL2
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADG67059.1}; species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Planctopirus.;" source="Planctopirus limnophila (strain ATCC 43296 / DSM 3776 / IFAM 1008 /; 290) (Planctomyces limnophilus).;"
PLM4_65_coex_sep16_scaffold_10_14

Not on your lists

comp(10474..11115)
DNA (642bp) protein (214aa)
Marine sediment metagenome DNA, contig: S01H1_S34998 {ECO:0000313|EMBL:GAG36560.1}; Flags: Fragment;; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
PLM4_65_coex_sep16_scaffold_10_15
unknown

Not on your lists

comp(11762..12766)
DNA (1005bp) protein (335aa)

This feature has no annotations

PLM4_65_coex_sep16_scaffold_10_16
unknown

Not on your lists

13104..14009
DNA (906bp) protein (302aa)

This feature has no annotations

PLM4_65_coex_sep16_scaffold_10_17

Not on your lists

14075..14416
DNA (342bp) protein (114aa)
Marine sediment metagenome DNA, contig: S01H1_S30442 {ECO:0000313|EMBL:GAG30297.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
PLM4_65_coex_sep16_scaffold_10_18
RBG_13_Planctomycetes_50_24_curated, Physcisphaerae, Planctomycetes, Bacteria

Not on your lists

comp(14719..15519)
DNA (801bp) protein (267aa)
hypothetical protein Tax=Bacillus sp. L1(2012) RepID=UPI000348CCF3
xerC; integrase/recombinase
Tax=RBG_13_Planctomycetes_50_24_curated
PLM4_65_coex_sep16_scaffold_10_19
unknown

Not on your lists

comp(15592..16041)
DNA (450bp) protein (150aa)

This feature has no annotations

PLM4_65_coex_sep16_scaffold_10_20
RBG_16_Planctomycetes_55_9_curated, Phycisphaerae, Planctomycetes, Bacteria

Not on your lists

16844..19414
DNA (2571bp) protein (857aa)
id=4956895 bin=GWC2_Planctomycetes_45_44 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Planctomycetes_45_44 organism_group=Planctomycetes organism_desc=Novel; good
hypothetical protein
Tax=RBG_16_Planctomycetes_55_9_curated
PLM4_65_coex_sep16_scaffold_10_21
RBG_13_Planctomycetes_46_10_curated, Phycisphaerae, Planctomycetes, Bacteria

Not on your lists

comp(19571..20287)
DNA (717bp) protein (239aa)
isochorismatase hydrolase bin=GWF2_Planctomycetes_50_10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Planctomycetes_50_10 organism_group=Planctomycetes
Tax=RBG_13_Planctomycetes_46_10_curated
PLM4_65_coex_sep16_scaffold_10_22
RBG_19FT_COMBO_Planctomycetes_48_8_curated, Physcisphaerae, Planctomycetes, Bacteria

Not on your lists

20500..21516
DNA (1017bp) protein (339aa)
Uncharacterized protein Tax=Bradyrhizobium sp. S23321 RepID=I0GES4_9BRAD
hypothetical protein
Tax=RBG_19FT_COMBO_Planctomycetes_48_8_curated
PLM4_65_coex_sep16_scaffold_10_23
RBG_19FT_COMBO_Planctomycetes_48_8_curated, Physcisphaerae, Planctomycetes, Bacteria

Not on your lists

21516..22532
DNA (1017bp) protein (339aa)
D-alanine--D-alanine ligase domain protein bin=GWC2_Planctomycetes_45_44 species=Bdellovibrio exovorus genus=Bdellovibrio taxon_order=Bdellovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Planctomycetes_45_44 organism_group=Planctomycetes organism_desc=Novel; good
hypothetical protein
Tax=RBG_19FT_COMBO_Planctomycetes_48_8_curated
PLM4_65_coex_sep16_scaffold_10_24
RBG_16_Planctomycetes_55_9_curated, Phycisphaerae, Planctomycetes, Bacteria

Not on your lists

comp(22534..24735)
DNA (2202bp) protein (734aa)
hypothetical protein Tax=Armatimonadetes bacterium JGI 0000077-K19 RepID=UPI0003B560F1
hypothetical protein
Tax=RBG_16_Planctomycetes_55_9_curated
PLM4_65_coex_sep16_scaffold_10_25
RBG_19FT_COMBO_Planctomycetes_48_8_curated, Physcisphaerae, Planctomycetes, Bacteria

Not on your lists

comp(24746..25507)
DNA (762bp) protein (254aa)
Histidine biosynthesis protein Tax=Desulfococcus oleovorans (strain DSM 6200 / Hxd3) RepID=A8ZVG8_DESOH
histidine biosynthesis protein
Tax=RBG_19FT_COMBO_Planctomycetes_48_8_curated
PLM4_65_coex_sep16_scaffold_10_26
RBG_13_Planctomycetes_62_9_curated, Phycisphaerae, Planctomycetes, Bacteria

Not on your lists

25808..26737
DNA (930bp) protein (310aa)
Uncharacterized protein Tax=Methylobacterium extorquens (strain DSM 5838 / DM4) RepID=C7CM55_METED
hypothetical protein
Tax=RBG_13_Planctomycetes_62_9_curated
PLM4_65_coex_sep16_scaffold_10_27
RBG_13_Planctomycetes_62_9_curated, Phycisphaerae, Planctomycetes, Bacteria

Not on your lists

26765..28504
DNA (1740bp) protein (580aa)
Putative efflux system outer membrane protein Tax=Phycisphaera mikurensis (strain NBRC 102666 / KCTC 22515 / FYK2301M01) RepID=I0IFG3_PHYMF
putative efflux system outer membrane protein
Tax=RBG_13_Planctomycetes_62_9_curated
PLM4_65_coex_sep16_scaffold_10_28

Not on your lists

comp(28544..30526)
DNA (1983bp) protein (661aa)
Protein translocase subunit SecA Tax=Phycisphaera mikurensis (strain NBRC 102666 / KCTC 22515 / FYK2301M01) RepID=I0IEX2_PHYMF
Uncharacterized protein {ECO:0000313|EMBL:KKN82118.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
secA; protein translocase subunit SecA
PLM4_65_coex_sep16_scaffold_10_29
RBG_13_Planctomycetes_62_9_curated, Phycisphaerae, Planctomycetes, Bacteria

Not on your lists

comp(30528..32714)
DNA (2187bp) protein (729aa)
Peptidase M50 family protein Tax=Phycisphaera mikurensis (strain NBRC 102666 / KCTC 22515 / FYK2301M01) RepID=I0IEX1_PHYMF
peptidase M50 family protein
Tax=RBG_13_Planctomycetes_62_9_curated
Displaying items 1-30 of 201 in total

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