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PLM4_65_coex_sep16_scaffold_92

Search features with annotation key words

Displaying items 1-30 of 54 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_coex_sep16_scaffold_92_1
unknown

Not on your lists

2..103
DNA (102bp) protein (34aa)

This feature has no annotations

PLM4_65_coex_sep16_scaffold_92_2
unknown

Not on your lists

202..825
DNA (624bp) protein (208aa)
hypothetical protein
PLM4_65_coex_sep16_scaffold_92_3
RBG_19FT_COMBO_Planctomycetes_48_8_curated, Physcisphaerae, Planctomycetes, Bacteria

Not on your lists

comp(1327..2514)
DNA (1188bp) protein (396aa)
Glucoamylase and related glycosyl hydrolase bin=GWD1_TM7_39_7 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD1_TM7_39_7 organism_group=CPR2 organism_desc=Same as C1_41_48, C2_39_35, D2_39_7
glucoamylase
Tax=RBG_19FT_COMBO_Planctomycetes_48_8_curated
PLM4_65_coex_sep16_scaffold_92_4
RBG_16_Planctomycetes_55_9_curated, Phycisphaerae, Planctomycetes, Bacteria

Not on your lists

2650..3528
DNA (879bp) protein (293aa)
Hydrolase, carbon-nitrogen family Tax=Clostridium difficile RepID=D5Q913_CLODI
carbon-nitrogen hydrolase
Tax=RBG_16_Planctomycetes_55_9_curated
PLM4_65_coex_sep16_scaffold_92_5
RBG_16_Planctomycetes_55_9_curated, Phycisphaerae, Planctomycetes, Bacteria

Not on your lists

comp(3544..6177)
DNA (2634bp) protein (878aa)
hypothetical protein Tax=Candidatus Latescibacter anaerobius SCGC AAA252-E07 RepID=UPI0003B785B8
gamma-glutamyltransferase 2
Tax=RBG_16_Planctomycetes_55_9_curated
PLM4_65_coex_sep16_scaffold_92_6
RBG_16_Planctomycetes_55_9_curated, Phycisphaerae, Planctomycetes, Bacteria

Not on your lists

6527..7585
DNA (1059bp) protein (353aa)
arabinogalactan endo-1,4-beta-galactosidase (EC:3.2.1.89)
Arabinogalactan endo-1,4-beta-galactosidase Tax=Opitutus terrae (strain DSM 11246 / PB90-1) RepID=B1ZNL3_OPITP
Tax=RBG_16_Planctomycetes_55_9_curated
PLM4_65_coex_sep16_scaffold_92_7
RBG_13_Planctomycetes_62_9_curated, Phycisphaerae, Planctomycetes, Bacteria

Not on your lists

7657..8517
DNA (861bp) protein (287aa)
hypothetical protein Tax=Hydrogenedentes bacterium JGI 0000039-J10 RepID=UPI00035E378C
Tax=RBG_13_Planctomycetes_62_9_curated
PLM4_65_coex_sep16_scaffold_92_8
GWA2_Bacteroidetes_40_15_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(8523..10502)
DNA (1980bp) protein (660aa)
Putative uncharacterized protein (Fragment) bin=GWC2_Bacteroidetes_40_22 species=unknown genus=unknown taxon_order=unknown taxon_class=Opitutae phylum=Verrucomicrobia tax=GWC2_Bacteroidetes_40_22 organism_group=Bacteroidetes
hypothetical protein
Tax=GWA2_Bacteroidetes_40_15_curated
PLM4_65_coex_sep16_scaffold_92_9
RBG_13_Planctomycetes_62_9_curated, Phycisphaerae, Planctomycetes, Bacteria

Not on your lists

10726..12780
DNA (2055bp) protein (685aa)
hypothetical protein Tax=Schlesneria paludicola RepID=UPI000299E98E
hypothetical protein
Tax=RBG_13_Planctomycetes_62_9_curated
PLM4_65_coex_sep16_scaffold_92_10
RBG_13_Planctomycetes_50_24_curated, Physcisphaerae, Planctomycetes, Bacteria

Not on your lists

12918..14054
DNA (1137bp) protein (379aa)
hypothetical protein Tax=Desulfovibrio oxyclinae RepID=UPI0003752156
RND family efflux transporter MFP subunit
Tax=RBG_13_Planctomycetes_50_24_curated
PLM4_65_coex_sep16_scaffold_92_11
RBG_13_Planctomycetes_60_9_curated, Phycisphaerae, Planctomycetes, Bacteria

Not on your lists

14060..17191
DNA (3132bp) protein (1044aa)
Acriflavin resistance protein bin=GWC2_Pelobacter_58_13 species=Desulfarculus baarsii genus=Desulfarculus taxon_order=Desulfarculales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Pelobacter_58_13 organism_group=Deltaproteobacteria organism_desc=Good +
acriflavin resistance protein
Tax=RBG_13_Planctomycetes_60_9_curated
PLM4_65_coex_sep16_scaffold_92_12

Not on your lists

comp(17201..18043)
DNA (843bp) protein (281aa)
hypothetical protein Tax=SAR324 cluster bacterium SCGC AAA001-C10 RepID=UPI0002883EF4
Marine sediment metagenome DNA, contig: S06H3_L00205 {ECO:0000313|EMBL:GAI05562.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
PLM4_65_coex_sep16_scaffold_92_13
RBG_13_Planctomycetes_62_9_curated, Phycisphaerae, Planctomycetes, Bacteria

Not on your lists

18352..21252
DNA (2901bp) protein (967aa)
Uncharacterized protein Tax=Bacteroides oleiciplenus YIT 12058 RepID=K9EEK1_9BACE
alpha-L-rhamnosidase
Tax=RBG_13_Planctomycetes_62_9_curated
PLM4_65_coex_sep16_scaffold_92_14
RBG_13_Planctomycetes_50_24_curated, Physcisphaerae, Planctomycetes, Bacteria

Not on your lists

21286..22926
DNA (1641bp) protein (547aa)
hypothetical protein Tax=Methylobacter marinus RepID=UPI00037AEBC3
pectate lyase
Tax=RBG_13_Planctomycetes_50_24_curated
PLM4_65_coex_sep16_scaffold_92_trna_1
unknown

Not on your lists

23084..23155
DNA (72bp)
transferRNA Thr
PLM4_65_coex_sep16_scaffold_92_15
CG_Delta_03, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23491..24885
DNA (1395bp) protein (465aa)
Doubled CXXCH domain-containing protein Tax=Desulfocapsa sulfexigens (strain DSM 10523 / SB164P1) RepID=M1P0U9_DESSD
doubled CXXCH domain-containing protein
Tax=CG_Delta_03
PLM4_65_coex_sep16_scaffold_92_16
unknown

Not on your lists

24937..25968
DNA (1032bp) protein (344aa)

This feature has no annotations

PLM4_65_coex_sep16_scaffold_92_17
GWD2_Desulfuromonadales_54_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26004..26492
DNA (489bp) protein (163aa)
Rieske Fe-S protein Tax=Hippea alviniae RepID=UPI0003B6E9DA
Rieske (2Fe-2S) domain-containing protein
Tax=GWD2_Desulfuromonadales_54_10_curated
PLM4_65_coex_sep16_scaffold_92_18
GWA2_RIF03_38_11_curated, RIF3, Bacteria

Not on your lists

26499..27170
DNA (672bp) protein (224aa)
cytochrome b subunit of the bc complex
Cytochrome bc complex cytochrome b subunit bin=RBG1 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=RBG1 organism_group=Zixibacteria
Tax=GWA2_RIF03_38_11_curated
PLM4_65_coex_sep16_scaffold_92_19
RBG_19FT_COMBO_Chloroflexi_50_10_curated, Chloroflexi, Bacteria

Not on your lists

27204..28235
DNA (1032bp) protein (344aa)
Cytochrome b bin=GWC2_Pelobacter_58_13 species=Geobacter metallireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Pelobacter_58_13 organism_group=Deltaproteobacteria organism_desc=Good +
cytochrome c1
Tax=RBG_19FT_COMBO_Chloroflexi_50_10_curated
PLM4_65_coex_sep16_scaffold_92_20
GWC2_Geobacteraceae_58_44_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28232..29152
DNA (921bp) protein (307aa)
cytochrome c family protein bin=bin1_lowGC species=Geobacter sp. genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin1_lowGC organism_group=Unknown_CP
cytochrome C family protein
Tax=GWC2_Geobacteraceae_58_44_curated
PLM4_65_coex_sep16_scaffold_92_21
RBG_16_Planctomycetes_55_9_curated, Phycisphaerae, Planctomycetes, Bacteria

Not on your lists

comp(29199..30074)
DNA (876bp) protein (292aa)
hypothetical protein Tax=Hydrogenedentes bacterium JGI 0000039-J10 RepID=UPI00035E378C
Tax=RBG_16_Planctomycetes_55_9_curated
PLM4_65_coex_sep16_scaffold_92_22
RBG_16_Planctomycetes_55_9_curated, Phycisphaerae, Planctomycetes, Bacteria

Not on your lists

comp(30085..31401)
DNA (1317bp) protein (439aa)
Dehydrogenase Tax=Halanaerobium saccharolyticum subsp. saccharolyticum DSM 6643 RepID=M5ED98_9FIRM
alcohol dehydrogenase
Tax=RBG_16_Planctomycetes_55_9_curated
PLM4_65_coex_sep16_scaffold_92_23
Rhodopirellula europaea, Rhodopirellula, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(31459..32529)
DNA (1071bp) protein (357aa)
Xylose isomerase domain protein TIM barrel Tax=Rhodopirellula europaea SH398 RepID=M5SGT8_9PLAN
Xylose isomerase domain protein TIM barrel {ECO:0000313|EMBL:EMI25404.1}; species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Rhodopirellula.;" source="Rhodopirellula europaea SH398.;"
xylose isomerase domain-containing protein
PLM4_65_coex_sep16_scaffold_92_24
RBG_16_Planctomycetes_55_9_curated, Phycisphaerae, Planctomycetes, Bacteria

Not on your lists

comp(32574..34034)
DNA (1461bp) protein (487aa)
Oxidoreductase domain protein Tax=Pedosphaera parvula Ellin514 RepID=B9XN71_9BACT
oxidoreductase domain protein
Tax=RBG_16_Planctomycetes_55_9_curated
PLM4_65_coex_sep16_scaffold_92_25
RBG_16_Planctomycetes_55_9_curated, Phycisphaerae, Planctomycetes, Bacteria

Not on your lists

comp(34053..34766)
DNA (714bp) protein (238aa)
hypothetical protein Tax=Verrucomicrobia bacterium SCGC AAA164-E04 RepID=UPI000372223D
short-chain dehydrogenase/reductase SDR
Tax=RBG_16_Planctomycetes_55_9_curated
PLM4_65_coex_sep16_scaffold_92_26
RBG_16_Planctomycetes_55_9_curated, Phycisphaerae, Planctomycetes, Bacteria

Not on your lists

comp(34825..35691)
DNA (867bp) protein (289aa)
garR; 2-hydroxy-3-oxopropionate reductase (EC:1.1.1.60)
2-hydroxy-3-oxopropionate reductase Tax=Treponema primitia (strain ATCC BAA-887 / DSM 12427 / ZAS-2) RepID=F5YRC6_TREPZ
Tax=RBG_16_Planctomycetes_55_9_curated
PLM4_65_coex_sep16_scaffold_92_27
RBG_16_Planctomycetes_55_9_curated, Phycisphaerae, Planctomycetes, Bacteria

Not on your lists

comp(35820..36854)
DNA (1035bp) protein (345aa)
Transaldolase bin=GWC2_Planctomycetes_45_44 species=Sphaerochaeta globosa genus=Sphaerochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWC2_Planctomycetes_45_44 organism_group=Planctomycetes organism_desc=Novel; good
transaldolase
Tax=RBG_16_Planctomycetes_55_9_curated
PLM4_65_coex_sep16_scaffold_92_28
RBG_13_Planctomycetes_46_10_curated, Phycisphaerae, Planctomycetes, Bacteria

Not on your lists

comp(36935..37810)
DNA (876bp) protein (292aa)
Putative uncharacterized protein bin=GWC2_Planctomycetes_45_44 species=Desulfatibacillum alkenivorans genus=Desulfatibacillum taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Planctomycetes_45_44 organism_group=Planctomycetes organism_desc=Novel; good
hypothetical protein
Tax=RBG_13_Planctomycetes_46_10_curated
PLM4_65_coex_sep16_scaffold_92_29

Not on your lists

37965..38465
DNA (501bp) protein (167aa)
purE; phosphoribosylaminoimidazole carboxylase, catalytic subunit (EC:4.1.1.21)
Marine sediment metagenome DNA, contig: S01H1_L07706 {ECO:0000313|EMBL:GAF75961.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
N5-carboxyaminoimidazole ribonucleotide mutase bin=GWF2_Planctomycetes_42_9 species=SAR86 cluster bacterium SAR86A genus=unknown taxon_order=unknown taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF2_Planctomycetes_42_9 organism_group=Planctomycetes
Displaying items 1-30 of 54 in total

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