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PLM4_65_coex_sep16_scaffold_139

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Displaying items 1-30 of 49 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_coex_sep16_scaffold_139_1
RBG_13_Planctomycetes_46_10_curated, Phycisphaerae, Planctomycetes, Bacteria

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197..1042
DNA (846bp) protein (282aa)
Tax=RBG_13_Planctomycetes_46_10_curated
PLM4_65_coex_sep16_scaffold_139_2
GWA2_Bacteroidetes_40_15_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(1206..1928)
DNA (723bp) protein (241aa)
Exonuclease RNase T and DNA polymerase III bin=GWA2_Bacteroidetes_A19_40_15 species=Cylindrospermum stagnale genus=Cylindrospermum taxon_order=Nostocales taxon_class=unknown phylum=Cyanobacteria tax=GWA2_Bacteroidetes_A19_40_15 organism_group=Bacteroidetes
DNA polymerase III epsilon subunit-like 3'-5' exonuclease
Tax=GWA2_Bacteroidetes_40_15_curated
PLM4_65_coex_sep16_scaffold_139_3
RBG_13_Planctomycetes_63_9_curated, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(2084..3214)
DNA (1131bp) protein (377aa)
Glycosidase Tax=Rhodopirellula sp. SWK7 RepID=M5TI20_9PLAN
signal peptide-domain containing protein
Tax=RBG_13_Planctomycetes_63_9_curated
PLM4_65_coex_sep16_scaffold_139_4
RBG_13_Planctomycetes_62_9_curated, Phycisphaerae, Planctomycetes, Bacteria

Not on your lists

comp(3465..4952)
DNA (1488bp) protein (496aa)
Uncharacterized protein Tax=Chthoniobacter flavus Ellin428 RepID=B4D5P1_9BACT
Neutral/alkaline non-lysosomal ceramidase
Tax=RBG_13_Planctomycetes_62_9_curated
PLM4_65_coex_sep16_scaffold_139_5
GWA2_Bacteroidetes_40_15_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(4995..6389)
DNA (1395bp) protein (465aa)
Putative uncharacterized protein bin=GWC2_Bacteroidetes_40_22 species=Runella slithyformis genus=Runella taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWC2_Bacteroidetes_40_22 organism_group=Bacteroidetes
hypothetical protein
Tax=GWA2_Bacteroidetes_40_15_curated
PLM4_65_coex_sep16_scaffold_139_6
Flammeovirgaceae bacterium 311, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

6664..8028
DNA (1365bp) protein (455aa)
Uncharacterized protein Tax=Fibrisoma limi BUZ 3 RepID=I2GLW5_9BACT
Uncharacterized protein {ECO:0000313|EMBL:AHM63051.1}; species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Flammeovirgaceae; unclassified Flammeovirgaceae.;" source="Flammeovirgaceae bacterium 311.;"
hypothetical protein
PLM4_65_coex_sep16_scaffold_139_7

Not on your lists

comp(8044..8823)
DNA (780bp) protein (260aa)
Marine sediment metagenome DNA, contig: S01H4_S01558 {ECO:0000313|EMBL:GAG84945.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
Putative uncharacterized protein bin=GWC2_Planctomycetes_45_44 species=Pedosphaera parvula genus=Pedosphaera taxon_order=Verrucomicrobiales taxon_class=Verrucomicrobiae phylum=Verrucomicrobia tax=GWC2_Planctomycetes_45_44 organism_group=Planctomycetes organism_desc=Novel; good
hypothetical protein
PLM4_65_coex_sep16_scaffold_139_8
RBG_13_Planctomycetes_50_24_curated, Physcisphaerae, Planctomycetes, Bacteria

Not on your lists

comp(8930..12340)
DNA (3411bp) protein (1137aa)
Ig family protein bin=GWF2_Planctomycete_41_51 species=Chthoniobacter flavus genus=Chthoniobacter taxon_order=unknown taxon_class=Spartobacteria phylum=Verrucomicrobia tax=GWF2_Planctomycete_41_51 organism_group=Planctomycetes organism_desc=a211
hypothetical protein
Tax=RBG_13_Planctomycetes_50_24_curated
PLM4_65_coex_sep16_scaffold_139_9
RBG_16_Planctomycetes_55_9_curated, Phycisphaerae, Planctomycetes, Bacteria

Not on your lists

12848..13420
DNA (573bp) protein (191aa)
heterodisulfide reductase subunit C Tax=Desulfospira joergensenii RepID=UPI0003B30CA3
heterodisulfide reductase subunit C
Tax=RBG_16_Planctomycetes_55_9_curated
PLM4_65_coex_sep16_scaffold_139_10
RBG_16_Planctomycetes_55_9_curated, Phycisphaerae, Planctomycetes, Bacteria

Not on your lists

13497..14468
DNA (972bp) protein (324aa)
CoB--CoM heterodisulfide reductase (EC:1.8.98.1)
heterodisulfide reductase subunit B Tax=Desulfospira joergensenii RepID=UPI0003B39D00
Tax=RBG_16_Planctomycetes_55_9_curated
PLM4_65_coex_sep16_scaffold_139_11

Not on your lists

14503..15384
DNA (882bp) protein (294aa)
Marine sediment metagenome DNA, contig: S01H1_S07151 {ECO:0000313|EMBL:GAG09198.1}; Flags: Fragment;; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
NADH-quinone oxidoreductase, E subunit bin=CD_OP8_4m species=Phascolarctobacterium succinatutens genus=Phascolarctobacterium taxon_order=Selenomonadales taxon_class=Negativicutes phylum=Firmicutes tax=CD_OP8_4m organism_group=OP8 (Aminicenantes)
polyferredoxin, heterodixulfide reductase subunit A
PLM4_65_coex_sep16_scaffold_139_12
RBG_16_Planctomycetes_64_12_curated, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

15398..15781
DNA (384bp) protein (128aa)
Ferredoxin bin=GWF2_WWE1_40_14 species=Desulfomonile tiedjei genus=Desulfomonile taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_WWE1_40_14 organism_group=WWE1
ferredoxin
Tax=RBG_16_Planctomycetes_64_12_curated
PLM4_65_coex_sep16_scaffold_139_13
RBG_16_Planctomycetes_64_12_curated, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

15809..17602
DNA (1794bp) protein (598aa)
NADH dehydrogenase Tax=Aminicenantes bacterium SCGC AAA252-K06 RepID=UPI0003B5842D
NADH:ubiquinone oxidoreductase, NADH-binding (51 kD) subunit
Tax=RBG_16_Planctomycetes_64_12_curated
PLM4_65_coex_sep16_scaffold_139_14
RBG_16_Planctomycetes_55_9_curated, Phycisphaerae, Planctomycetes, Bacteria

Not on your lists

17599..17961
DNA (363bp) protein (121aa)
hypothetical protein Tax=candidate division OP9 bacterium OP9-77CS RepID=UPI0003632FB0
DRTGG domain.
Tax=RBG_16_Planctomycetes_55_9_curated
PLM4_65_coex_sep16_scaffold_139_15
RBG_16_Planctomycetes_55_9_curated, Phycisphaerae, Planctomycetes, Bacteria

Not on your lists

18036..19007
DNA (972bp) protein (324aa)
hypothetical protein Tax=Candidatus Latescibacter anaerobius SCGC AAA252-E07 RepID=UPI0003B685A9
hypothetical protein
Tax=RBG_16_Planctomycetes_55_9_curated
PLM4_65_coex_sep16_scaffold_139_16
RBG_16_Planctomycetes_64_12_curated, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

18979..19311
DNA (333bp) protein (111aa)
hypothetical protein Tax=Candidatus Latescibacter anaerobius SCGC AAA252-E07 RepID=UPI0003B4879F
DRTGG domain-containing protein
Tax=RBG_16_Planctomycetes_64_12_curated
PLM4_65_coex_sep16_scaffold_139_17

Not on your lists

19308..20024
DNA (717bp) protein (239aa)
Uncharacterized protein {ECO:0000313|EMBL:KKL67097.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
Putative metal-dependent phosphoesterase, PHP family bin=GWF2_WWE1_40_14 species=Desulfomonile tiedjei genus=Desulfomonile taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_WWE1_40_14 organism_group=WWE1
putative metal-dependent phosphoesterase, PHP family
PLM4_65_coex_sep16_scaffold_139_18

Not on your lists

20026..20484
DNA (459bp) protein (153aa)
histidine kinase Tax=Candidatus Latescibacter anaerobius SCGC AAA252-E07 RepID=UPI0003B477DD
Uncharacterized protein {ECO:0000313|EMBL:KKL67096.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
histidine kinase
PLM4_65_coex_sep16_scaffold_139_19

Not on your lists

20481..23732
DNA (3252bp) protein (1084aa)
Uncharacterized protein {ECO:0000313|EMBL:KKN33452.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
Putative uncharacterized protein bin=CD_OP8_4m species=uncultured Desulfobacterium sp. genus=Desulfobacterium taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=CD_OP8_4m organism_group=OP8 (Aminicenantes)
ferredoxin
PLM4_65_coex_sep16_scaffold_139_20

Not on your lists

24004..24420
DNA (417bp) protein (139aa)
Uncharacterized protein {ECO:0000313|EMBL:KKN33453.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
Methyl-viologen-reducing hydrogenase delta subunit bin=CD_OP8_4m species=unknown genus=unknown taxon_order=unknown taxon_class=Dehalococcoidia phylum=Chloroflexi tax=CD_OP8_4m organism_group=OP8 (Aminicenantes)
methyl-viologen-reducing hydrogenase subunit delta
PLM4_65_coex_sep16_scaffold_139_21
RBG_16_Spirochaete_67_19_curated, Spirochaetales, Spirochaetia, Spirochatetes, Bacteria

Not on your lists

24508..24699
DNA (192bp) protein (64aa)
Uncharacterized protein Tax=Dehalogenimonas lykanthroporepellens (strain ATCC BAA-1523 / JCM 15061 / BL-DC-9) RepID=D8K0A6_DEHLB
hypothetical protein
Tax=RBG_16_Spirochaete_67_19_curated
PLM4_65_coex_sep16_scaffold_139_22
GWA2_Elusimicrobia_69_24_curated, Elusimicrobia, Bacteria

Not on your lists

24818..25222
DNA (405bp) protein (135aa)
Response regulator receiver bin=GWA2_Elusimicrobia_69_24 species=Dechloromonas aromatica genus=Dechloromonas taxon_order=Rhodocyclales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWA2_Elusimicrobia_69_24 organism_group=Elusimicrobia
response regulator
Tax=GWA2_Elusimicrobia_69_24_curated
PLM4_65_coex_sep16_scaffold_139_23
RBG_16_Planctomycetes_55_9_curated, Phycisphaerae, Planctomycetes, Bacteria

Not on your lists

25339..26289
DNA (951bp) protein (317aa)
NADH ubiquinone oxidoreductase 20 kDa subunit bin=GWA2_Elusimicrobia_69_24 species=Dehalogenimonas lykanthroporepellens genus=Dehalogenimonas taxon_order=unknown taxon_class=Dehalococcoidia phylum=Chloroflexi tax=GWA2_Elusimicrobia_69_24 organism_group=Elusimicrobia
NADH ubiquinone oxidoreductase 20 kDa subunit
Tax=RBG_16_Planctomycetes_55_9_curated
PLM4_65_coex_sep16_scaffold_139_24
RBG_16_Planctomycetes_55_9_curated, Phycisphaerae, Planctomycetes, Bacteria

Not on your lists

26305..27747
DNA (1443bp) protein (481aa)
Nickel-dependent hydrogenase large subunit bin=GWA2_Elusimicrobia_69_24 species=Dehalogenimonas lykanthroporepellens genus=Dehalogenimonas taxon_order=unknown taxon_class=Dehalococcoidia phylum=Chloroflexi tax=GWA2_Elusimicrobia_69_24 organism_group=Elusimicrobia
nickel-dependent hydrogenase large subunit
Tax=RBG_16_Planctomycetes_55_9_curated
PLM4_65_coex_sep16_scaffold_139_25
unknown

Not on your lists

comp(27636..27851)
DNA (216bp) protein (72aa)

This feature has no annotations

PLM4_65_coex_sep16_scaffold_139_26
RBG_16_Planctomycetes_55_9_curated, Phycisphaerae, Planctomycetes, Bacteria

Not on your lists

27939..29456
DNA (1518bp) protein (506aa)
Periplasmic sensor signal transduction histidine kinase bin=GWA1_Deltaproteobacteria_52_35 species=Nitrosospira sp. APG3 genus=Nitrosospira taxon_order=Nitrosomonadales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWA1_Deltaproteobacteria_52_35 organism_group=Deltaproteobacteria organism_desc=Good + Candidate for further analysis!
periplasmic sensor signal transduction histidine kinase
Tax=RBG_16_Planctomycetes_55_9_curated
PLM4_65_coex_sep16_scaffold_139_27
RBG_13_Planctomycetes_50_24_curated, Physcisphaerae, Planctomycetes, Bacteria

Not on your lists

29472..29879
DNA (408bp) protein (136aa)
Response regulator receiver protein bin=GWA1_Deltaproteobacteria_52_35 species=Marvinbryantia formatexigens genus=Marvinbryantia taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA1_Deltaproteobacteria_52_35 organism_group=Deltaproteobacteria organism_desc=Good + Candidate for further analysis!
response regulator receiver protein
Tax=RBG_13_Planctomycetes_50_24_curated
PLM4_65_coex_sep16_scaffold_139_28

Not on your lists

29921..30406
DNA (486bp) protein (162aa)
Marine sediment metagenome DNA, contig: S01H1_S38121 {ECO:0000313|EMBL:GAG46763.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
Hydrogenase maturation protease bin=CD_OP8_4m species=unknown genus=Dehalococcoides taxon_order=Dehalococcoidales taxon_class=Dehalococcoidia phylum=Chloroflexi tax=CD_OP8_4m organism_group=OP8 (Aminicenantes)
hydrogenase maturation protease
PLM4_65_coex_sep16_scaffold_139_29
RBG_13_Planctomycetes_50_24_curated, Physcisphaerae, Planctomycetes, Bacteria

Not on your lists

31163..31615
DNA (453bp) protein (151aa)
Tax=RBG_13_Planctomycetes_50_24_curated
PLM4_65_coex_sep16_scaffold_139_30
RBG_16_Planctomycetes_55_9_curated, Phycisphaerae, Planctomycetes, Bacteria

Not on your lists

32071..32628
DNA (558bp) protein (186aa)
Tax=RBG_16_Planctomycetes_55_9_curated
Displaying items 1-30 of 49 in total

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