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PLM4_65_coex_sep16_scaffold_301

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Displaying 19 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_coex_sep16_scaffold_301_1
RBG_16_Zixibacteria_53_22_curated, Zixibacteria, Bacteria

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comp(220..537)
DNA (318bp) protein (106aa)
id=3224612 bin=GWF2_OP3_38_59 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_OP3_38_59 organism_group=OP3 (Omnitrophica) organism_desc=a159
Tax=RBG_16_Zixibacteria_53_22_curated
PLM4_65_coex_sep16_scaffold_301_2
RBG_16_Planctomycetes_55_9_curated, Phycisphaerae, Planctomycetes, Bacteria

Not on your lists

comp(1078..2427)
DNA (1350bp) protein (450aa)
Glutamine--scyllo-inositol transaminase bin=GWA2_Bacteroidetes_A19_40_15 species=Runella slithyformis genus=Runella taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWA2_Bacteroidetes_A19_40_15 organism_group=Bacteroidetes
glutamine--scyllo-inositol transaminase
Tax=RBG_16_Planctomycetes_55_9_curated
PLM4_65_coex_sep16_scaffold_301_3
unknown

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comp(2420..2572)
DNA (153bp) protein (51aa)

This feature has no annotations

PLM4_65_coex_sep16_scaffold_301_4
RBG_13_Planctomycetes_60_9_curated, Phycisphaerae, Planctomycetes, Bacteria

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2641..3969
DNA (1329bp) protein (443aa)
Probable NADH-dependent dehydrogenase bin=GWA2_Bacteroidetes_A19_40_15 species=Planctomyces maris genus=Planctomyces taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWA2_Bacteroidetes_A19_40_15 organism_group=Bacteroidetes
dehydrogenase
Tax=RBG_13_Planctomycetes_60_9_curated
PLM4_65_coex_sep16_scaffold_301_5
RBG_16_Planctomycetes_55_9_curated, Phycisphaerae, Planctomycetes, Bacteria

Not on your lists

4070..5194
DNA (1125bp) protein (375aa)
Non-specific serine/threonine protein kinase bin=GWC2_Planctomycete_KSU_39_26 species=Sorangium cellulosum genus=Sorangium taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Planctomycete_KSU_39_26 organism_group=Planctomycetes
Non-specific serine/threonine protein kinase
Tax=RBG_16_Planctomycetes_55_9_curated
PLM4_65_coex_sep16_scaffold_301_6
RBG_13_Planctomycetes_62_9_curated, Phycisphaerae, Planctomycetes, Bacteria

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5238..8636
DNA (3399bp) protein (1133aa)
hypothetical protein bin=RBG_19FT_COMBO_Aminicenantes_rel_58_17_partial species=Coraliomargarita sp. CAG:312 genus=Coraliomargarita taxon_order=Puniceicoccales taxon_class=Opitutae phylum=Verrucomicrobia tax=RBG_19FT_COMBO_Aminicenantes_rel_58_17_partial organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
tetratricopeptide repeat containing protein
Tax=RBG_13_Planctomycetes_62_9_curated
PLM4_65_coex_sep16_scaffold_301_7
BJP_IG2158_Planctomycetes_45_10, Phycisphaerae, Planctomycetes, Bacteria

Not on your lists

8882..10237
DNA (1356bp) protein (452aa)
3-phosphoshikimate 1-carboxyvinyltransferase (EC:2.5.1.19)
3-phosphoshikimate 1-carboxyvinyltransferase bin=GWF2_Planctomycete_41_51 species=Clostridium thermocellum genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Planctomycete_41_51 organism_group=Planctomycetes organism_desc=a211
Tax=BJP_IG2158_Planctomycetes_45_10
PLM4_65_coex_sep16_scaffold_301_8
RBG_16_Planctomycetes_55_9_curated, Phycisphaerae, Planctomycetes, Bacteria

Not on your lists

10332..11672
DNA (1341bp) protein (447aa)
aroC; Chorismate synthase (EC:4.2.3.5)
Chorismate synthase bin=GWF2_Lentisphaerae_49_21 species=Pseudozyma antarctica genus=Pseudozyma taxon_order=Ustilaginales taxon_class=Ustilaginomycetes phylum=Basidiomycota tax=GWF2_Lentisphaerae_49_21 organism_group=Lentisphaerae organism_desc=Very large genome: good +
Tax=RBG_16_Planctomycetes_55_9_curated
PLM4_65_coex_sep16_scaffold_301_9
RBG_16_Planctomycetes_55_9_curated, Phycisphaerae, Planctomycetes, Bacteria

Not on your lists

comp(11763..21236)
DNA (9474bp) protein (3158aa)
Peptidase families S8 and S53 bin=GWC2_Planctomycetes_45_44 species=delta proteobacterium NaphS2 genus=unknown taxon_order=unknown taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Planctomycetes_45_44 organism_group=Planctomycetes organism_desc=Novel; good
subtilisin-like serine protease
Tax=RBG_16_Planctomycetes_55_9_curated
PLM4_65_coex_sep16_scaffold_301_10
GWF2_Planctomycetes_50_10_curated, Phycisphaerae, Planctomycetes, Bacteria

Not on your lists

comp(21379..24648)
DNA (3270bp) protein (1090aa)
Uncharacterized protein bin=GWF2_Planctomycetes_50_10 species=Phycisphaera mikurensis genus=Phycisphaera taxon_order=Phycisphaerales taxon_class=Phycisphaerae phylum=Planctomycetes tax=GWF2_Planctomycetes_50_10 organism_group=Planctomycetes
hypothetical protein
Tax=GWF2_Planctomycetes_50_10_curated
PLM4_65_coex_sep16_scaffold_301_11
RBG_13_Planctomycetes_60_9_curated, Phycisphaerae, Planctomycetes, Bacteria

Not on your lists

24935..25705
DNA (771bp) protein (257aa)
Universal bacterial protein YeaZ bin=GWC2_Planctomycetes_45_44 species=Veillonella sp. oral taxon 158 genus=Veillonella taxon_order=Selenomonadales taxon_class=Negativicutes phylum=Firmicutes tax=GWC2_Planctomycetes_45_44 organism_group=Planctomycetes organism_desc=Novel; good
peptidase M22 glycoprotease
Tax=RBG_13_Planctomycetes_60_9_curated
PLM4_65_coex_sep16_scaffold_301_12
RBG_13_Planctomycetes_44_8b_curated, Physcisphaerae, Planctomycetes, Bacteria

Not on your lists

comp(25883..29362)
DNA (3480bp) protein (1160aa)
S-layer domain-containing protein bin=GWF2_Planctomycete_41_51 species=Syntrophobotulus glycolicus genus=Syntrophobotulus taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Planctomycete_41_51 organism_group=Planctomycetes organism_desc=a211
hypothetical protein
Tax=RBG_13_Planctomycetes_44_8b_curated
PLM4_65_coex_sep16_scaffold_301_13
RBG_13_Planctomycetes_44_8b_curated, Physcisphaerae, Planctomycetes, Bacteria

Not on your lists

30556..31179
DNA (624bp) protein (208aa)
Redox-sensing transcriptional repressor rex bin=GWF2_Planctomycetes_50_10 species=Carboxydothermus hydrogenoformans genus=Carboxydothermus taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Planctomycetes_50_10 organism_group=Planctomycetes
rex; Redox-sensing transcriptional repressor rex
Tax=RBG_13_Planctomycetes_44_8b_curated
PLM4_65_coex_sep16_scaffold_301_14
RBG_13_Planctomycetes_46_10_curated, Phycisphaerae, Planctomycetes, Bacteria

Not on your lists

31292..32326
DNA (1035bp) protein (345aa)
Ni/Fe hydrogenase beta subunit bin=GWA1_Deltaproteobacteria_52_35 species=ACD79 genus=ACD79 taxon_order=ACD79 taxon_class=ACD79 phylum=Clamydiae tax=GWA1_Deltaproteobacteria_52_35 organism_group=Deltaproteobacteria organism_desc=Good + Candidate for further analysis!
response regulator receiver protein
Tax=RBG_13_Planctomycetes_46_10_curated
PLM4_65_coex_sep16_scaffold_301_15
RBG_13_Planctomycetes_46_10_curated, Phycisphaerae, Planctomycetes, Bacteria

Not on your lists

32376..33215
DNA (840bp) protein (280aa)
Oxidoreductase FAD/NAD(P)-binding domain protein Tax=Caldithrix abyssi DSM 13497 RepID=H1XQW9_9BACT
response regulator receiver protein
Tax=RBG_13_Planctomycetes_46_10_curated
PLM4_65_coex_sep16_scaffold_301_16
RBG_13_Planctomycetes_60_9_curated, Phycisphaerae, Planctomycetes, Bacteria

Not on your lists

33218..33973
DNA (756bp) protein (252aa)
F420-non-reducing hydrogenase vhu subunit G (EC:1.12.99.-)
NADH ubiquinone oxidoreductase 20 kDa subunit bin=GWC2_Deltaproteobacteria_42_51 species=Dehalogenimonas lykanthroporepellens genus=Dehalogenimonas taxon_order=unknown taxon_class=Dehalococcoidia phylum=Chloroflexi tax=GWC2_Deltaproteobacteria_42_51 organism_group=Deltaproteobacteria
Tax=RBG_13_Planctomycetes_60_9_curated
PLM4_65_coex_sep16_scaffold_301_17
RBG_13_Planctomycetes_60_9_curated, Phycisphaerae, Planctomycetes, Bacteria

Not on your lists

33966..35273
DNA (1308bp) protein (436aa)
Nickel-dependent hydrogenase large subunit bin=GWA1_Deltaproteobacteria_52_35 species=Caldithrix abyssi genus=Caldithrix taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA1_Deltaproteobacteria_52_35 organism_group=Deltaproteobacteria organism_desc=Good + Candidate for further analysis!
Ni/Fe hydrogenase, alpha subunit
Tax=RBG_13_Planctomycetes_60_9_curated
PLM4_65_coex_sep16_scaffold_301_18
RBG_13_Planctomycetes_60_9_curated, Phycisphaerae, Planctomycetes, Bacteria

Not on your lists

35284..35745
DNA (462bp) protein (154aa)
Hydrogenase maturation protease Tax=Denitrovibrio acetiphilus (strain DSM 12809 / N2460) RepID=D4H7J2_DENA2
hydrogenase maturation protease
Tax=RBG_13_Planctomycetes_60_9_curated
PLM4_65_coex_sep16_scaffold_301_19
RBG_19FT_COMBO_Planctomycetes_48_8_curated, Physcisphaerae, Planctomycetes, Bacteria

Not on your lists

comp(36093..36485)
DNA (393bp) protein (131aa)
Tax=RBG_19FT_COMBO_Planctomycetes_48_8_curated
Displaying 19 items

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