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PLM4_65_coex_sep16_scaffold_986

Search features with annotation key words

Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_coex_sep16_scaffold_986_1
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

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1..351
DNA (351bp) protein (117aa)
DNA processing chain A (DprA/Smf) Tax=Candidatus Methylomirabilis oxyfera RepID=D5MHP7_9BACT
DprA; DNA processing protein DprA
DNA processing chain A (DprA/Smf) {ECO:0000313|EMBL:CBE67180.1}; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
PLM4_65_coex_sep16_scaffold_986_2
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

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488..649
DNA (162bp) protein (54aa)
topA; DNA topoisomerase I (EC:5.99.1.2)
DNA topoisomerase 1 {ECO:0000256|HAMAP-Rule:MF_00952}; EC=5.99.1.2 {ECO:0000256|HAMAP-Rule:MF_00952, ECO:0000313|EMBL:CBE67181.1};; DNA topoisomerase I {ECO:0000256|HAMAP-Rule:MF_00952}; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
DNA topoisomerase 1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MHP8_9BACT
PLM4_65_coex_sep16_scaffold_986_3
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

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851..3007
DNA (2157bp) protein (719aa)
topA; DNA topoisomerase I (EC:5.99.1.2)
DNA topoisomerase 1 {ECO:0000256|HAMAP-Rule:MF_00952}; EC=5.99.1.2 {ECO:0000256|HAMAP-Rule:MF_00952, ECO:0000313|EMBL:CBE67181.1};; DNA topoisomerase I {ECO:0000256|HAMAP-Rule:MF_00952}; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
DNA topoisomerase 1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MHP8_9BACT
PLM4_65_coex_sep16_scaffold_986_4
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

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3004..4335
DNA (1332bp) protein (444aa)
Methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase TrmFO {ECO:0000256|HAMAP-Rule:MF_01037, ECO:0000256|SAAS:SAAS00089752}; EC=2.1.1.74 {ECO:0000256|HAMAP-Rule:MF_01037, ECO:0000256|SAAS:SAAS00089759};; Folate-dependent tRNA (uracil-5-)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01037}; Folate-dependent tRNA(M-5-U54)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01037}; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
Methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase TrmFO Tax=Candidatus Methylomirabilis oxyfera RepID=D5MHP9_9BACT
hypothetical protein
PLM4_65_coex_sep16_scaffold_986_5
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

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4764..5096
DNA (333bp) protein (111aa)
Putative uncharacterized protein Tax=uncultured candidate division OP1 bacterium RepID=H5SQY1_9BACT
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
PLM4_65_coex_sep16_scaffold_986_6
R_Acidobacteria_59_13, Acidobacteria, Bacteria

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5093..5281
DNA (189bp) protein (63aa)
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_59_13_curated
PLM4_65_coex_sep16_scaffold_986_7
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

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5516..6472
DNA (957bp) protein (319aa)
Tyrosine recombinase XerC Tax=Candidatus Methylomirabilis oxyfera RepID=D5MHQ6_9BACT
xerC; tyrosine recombinase XerC
Tyrosine recombinase XerC {ECO:0000256|HAMAP-Rule:MF_01808}; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
PLM4_65_coex_sep16_scaffold_986_8
CSP1_5_NC10, NC10, Bacteria

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6517..7119
DNA (603bp) protein (201aa)
hslV; ATP-dependent protease hslV (protease subunit of a proteasome-like degradation complex) (EC:3.4.25.-) bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Aminicenantes tax=bin3_NC10 organism_group=NC10
hslV; ATP-dependent protease hslV (protease subunit of a proteasome-like degradation complex) (EC:3.4.25.-)
Tax=CSP1_5_NC10
PLM4_65_coex_sep16_scaffold_986_9
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

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7172..8527
DNA (1356bp) protein (452aa)
ATP-dependent protease ATPase subunit HslU Tax=Candidatus Methylomirabilis oxyfera RepID=D5MHQ8_9BACT
hslU; ATPase component of the HslUV protease, also functions as molecular chaperone; heat shock protein
ATP-dependent protease ATPase subunit HslU {ECO:0000256|HAMAP-Rule:MF_00249, ECO:0000256|SAAS:SAAS00089650}; Unfoldase HslU {ECO:0000256|HAMAP-Rule:MF_00249}; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
PLM4_65_coex_sep16_scaffold_986_10
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

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8544..9464
DNA (921bp) protein (307aa)
argB; acetylglutamate kinase (AGK) (N-acetyl-L-glutamate 5-phosphotransferase) (EC:2.7.2.8)
Acetylglutamate kinase {ECO:0000256|SAAS:SAAS00245375}; EC=2.7.2.- {ECO:0000256|SAAS:SAAS00277142};; EC=2.7.2.8 {ECO:0000256|SAAS:SAAS00245383, ECO:0000313|EMBL:CBE67192.1};; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
Acetylglutamate kinase Tax=Candidatus Methylomirabilis oxyfera RepID=D5MHQ9_9BACT
PLM4_65_coex_sep16_scaffold_986_11
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

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9470..10669
DNA (1200bp) protein (400aa)
argD; acetylornithine transaminase (NAcOATase and DapATase), PLP-dependent (EC:2.6.1.17 2.6.1.11)
Acetylornithine aminotransferase {ECO:0000256|HAMAP-Rule:MF_01107}; Short=ACOAT {ECO:0000256|HAMAP-Rule:MF_01107};; EC=2.6.1.11 {ECO:0000256|HAMAP-Rule:MF_01107, ECO:0000313|EMBL:CBE67193.1};; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
Acetylornithine aminotransferase Tax=Candidatus Methylomirabilis oxyfera RepID=D5MHR0_9BACT
PLM4_65_coex_sep16_scaffold_986_12
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

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10666..11598
DNA (933bp) protein (311aa)
argF; ornithine carbamoyltransferase (EC:2.1.3.3)
Ornithine carbamoyltransferase {ECO:0000256|HAMAP-Rule:MF_01109, ECO:0000256|SAAS:SAAS00106174}; Short=OTCase {ECO:0000256|HAMAP-Rule:MF_01109};; EC=2.1.3.3 {ECO:0000256|HAMAP-Rule:MF_01109, ECO:0000256|SAAS:SAAS00106174};; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
Ornithine carbamoyltransferase Tax=Candidatus Methylomirabilis oxyfera RepID=D5MHR1_9BACT
PLM4_65_coex_sep16_scaffold_986_13
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

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11607..12905
DNA (1299bp) protein (433aa)
argG; Argininosuccinate synthase (Citrulline--aspartate ligase) (EC:6.3.4.5)
Argininosuccinate synthase {ECO:0000256|HAMAP-Rule:MF_00005, ECO:0000256|SAAS:SAAS00013047}; EC=6.3.4.5 {ECO:0000256|HAMAP-Rule:MF_00005, ECO:0000256|SAAS:SAAS00009947};; Citrulline--aspartate ligase {ECO:0000256|HAMAP-Rule:MF_00005}; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
Argininosuccinate synthase Tax=Candidatus Methylomirabilis oxyfera RepID=D5MHS0_9BACT
PLM4_65_coex_sep16_scaffold_986_14
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

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12902..14299
DNA (1398bp) protein (466aa)
argH; argininosuccinate lyase (EC:4.3.2.1)
Argininosuccinate lyase {ECO:0000256|HAMAP-Rule:MF_00006, ECO:0000256|SAAS:SAAS00211019}; Short=ASAL {ECO:0000256|HAMAP-Rule:MF_00006};; EC=4.3.2.1 {ECO:0000256|HAMAP-Rule:MF_00006, ECO:0000256|SAAS:SAAS00211017};; Arginosuccinase {ECO:0000256|HAMAP-Rule:MF_00006}; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
Argininosuccinate lyase Tax=Candidatus Methylomirabilis oxyfera RepID=D5MHS1_9BACT
PLM4_65_coex_sep16_scaffold_986_15
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

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14301..15347
DNA (1047bp) protein (349aa)
Putative Fibronectin, type III Tax=Candidatus Methylomirabilis oxyfera RepID=D5MHS2_9BACT
Fibronectin, type III
Putative Fibronectin, type III {ECO:0000313|EMBL:CBE67205.1}; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
PLM4_65_coex_sep16_scaffold_986_16
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

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15772..16563
DNA (792bp) protein (264aa)
hypothetical protein bin=ACD30 species=ACD30 genus=ACD30 taxon_order=ACD30 taxon_class=ACD30 phylum=OP11 tax=ACD30 organism_group=OP11 (Microgenomates) organism_desc=OP11
peptidase M10A and M12B matrixin and adamalysin
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM4_65_coex_sep16_scaffold_986_17
Opitutus terrae, Opitutus, Opitutales, Opitutae, Verrucomicrobia, Bacteria

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16585..17112
DNA (528bp) protein (176aa)
Uncharacterized protein Tax=Opitutus terrae (strain DSM 11246 / PB90-1) RepID=B2A0D0_OPITP
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACB77884.1}; Flags: Precursor;; species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae; Opitutus.;" source="Opitutus terrae (strain DSM 11246 / PB90-1).;"
PLM4_65_coex_sep16_scaffold_986_18
unknown

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18023..18148
DNA (126bp) protein (42aa)

This feature has no annotations

PLM4_65_coex_sep16_scaffold_986_19
RifOxyA12_full_Desulfobacterales_46_15_curated, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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18169..19308
DNA (1140bp) protein (380aa)
Uncharacterized protein Tax=uncultured bacterium RepID=K1Y7A4_9BACT
FIST domain-containing protein
Tax=RifOxyA12_full_Desulfobacterales_46_15_curated
PLM4_65_coex_sep16_scaffold_986_20
RBG_16_Gammaproteobacteria_57_12_curated, Gammaproteobacteria, Proteobacteria, Bacteria

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19311..19541
DNA (231bp) protein (77aa)
Two-component hybrid sensor and regulator Tax=Azospirillum sp. (strain B510) RepID=D3P631_AZOS1
putative hybrid sensor histidine kinase
Tax=RBG_16_Gammaproteobacteria_57_12_curated
Displaying 20 items

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