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PLM4_65_coex_sep16_scaffold_3261

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Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_coex_sep16_scaffold_3261_1
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

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1..453
DNA (453bp) protein (151aa)
selA; L-seryl-tRNA(Sec) selenium transferase (Selenocysteine synthase) (Sec synthase) (Selenocysteinyl-tRNA(Sec) synthase) (EC:2.9.1.1)
L-seryl-tRNA(Sec) selenium transferase {ECO:0000256|HAMAP-Rule:MF_00423, ECO:0000256|SAAS:SAAS00029253}; EC=2.9.1.1 {ECO:0000256|HAMAP-Rule:MF_00423, ECO:0000256|SAAS:SAAS00029254};; Selenocysteine synthase {ECO:0000256|HAMAP-Rule:MF_00423}; Selenocysteinyl-tRNA(Sec) synthase {ECO:0000256|HAMAP-Rule:MF_00423}; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
L-seryl-tRNA(Sec) selenium transferase Tax=Candidatus Methylomirabilis oxyfera RepID=D5MEN6_9BACT
PLM4_65_coex_sep16_scaffold_3261_2
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

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533..1177
DNA (645bp) protein (215aa)
tmk; thymidylate kinase (EC:2.7.4.9)
Thymidylate kinase {ECO:0000256|HAMAP-Rule:MF_00165, ECO:0000313|EMBL:CBE68216.1}; EC=2.7.4.9 {ECO:0000256|HAMAP-Rule:MF_00165, ECO:0000313|EMBL:CBE68216.1};; dTMP kinase {ECO:0000256|HAMAP-Rule:MF_00165}; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
Thymidylate kinase Tax=Candidatus Methylomirabilis oxyfera RepID=D5MEN7_9BACT
PLM4_65_coex_sep16_scaffold_3261_3
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

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1224..2276
DNA (1053bp) protein (351aa)
DNA polymerase III subunit delta' (EC:2.7.7.7)
DNA polymerase III, delta prime subunit {ECO:0000313|EMBL:CBE68217.1}; EC=2.7.7.7 {ECO:0000313|EMBL:CBE68217.1};; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
DNA polymerase III, delta prime subunit Tax=Candidatus Methylomirabilis oxyfera RepID=D5MEN8_9BACT
PLM4_65_coex_sep16_scaffold_3261_4
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

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2273..3172
DNA (900bp) protein (300aa)
Stage 0 sporulation protein yaaT (Modular protein) Tax=Candidatus Methylomirabilis oxyfera RepID=D5MEN9_9BACT
Stage 0 sporulation protein yaaT
Stage 0 sporulation protein yaaT (Modular protein) {ECO:0000313|EMBL:CBE68218.1}; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
PLM4_65_coex_sep16_scaffold_3261_5
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

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3169..5082
DNA (1914bp) protein (638aa)
metG; methionyl-tRNA synthetase (Methionine--tRNA ligase) (MetRS) (EC:6.1.1.10)
Methionine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_01228, ECO:0000256|SAAS:SAAS00252424}; EC=6.1.1.10 {ECO:0000256|HAMAP-Rule:MF_01228, ECO:0000256|SAAS:SAAS00252424};; Methionyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_01228}; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
Methionine--tRNA ligase Tax=Candidatus Methylomirabilis oxyfera RepID=D5MEP0_9BACT
PLM4_65_coex_sep16_scaffold_3261_6
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

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5270..6040
DNA (771bp) protein (257aa)
deoxyribonuclease (ycfH) (EC:3.1.21.-)
Putative deoxyribonuclease (YcfH) {ECO:0000313|EMBL:CBE68220.1}; EC=3.1.21.- {ECO:0000313|EMBL:CBE68220.1};; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
Putative deoxyribonuclease (YcfH) Tax=Candidatus Methylomirabilis oxyfera RepID=D5MEP1_9BACT
PLM4_65_coex_sep16_scaffold_3261_7
unknown

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6087..6212
DNA (126bp) protein (42aa)

This feature has no annotations

PLM4_65_coex_sep16_scaffold_3261_8
unknown

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6343..6474
DNA (132bp) protein (44aa)

This feature has no annotations

PLM4_65_coex_sep16_scaffold_3261_9
unknown

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6628..6819
DNA (192bp) protein (64aa)

This feature has no annotations

PLM4_65_coex_sep16_scaffold_3261_10
Acaryochloris marina, Acaryochloris, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

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6946..7551
DNA (606bp) protein (202aa)
Uncharacterized protein Tax=Acaryochloris marina (strain MBIC 11017) RepID=B0CEH1_ACAM1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABW26937.1}; species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Acaryochloris.;" source="Acaryochloris marina (strain MBIC 11017).;"
PLM4_65_coex_sep16_scaffold_3261_11
unknown

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7907..8044
DNA (138bp) protein (46aa)

This feature has no annotations

PLM4_65_coex_sep16_scaffold_3261_12
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

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8342..8641
DNA (300bp) protein (100aa)
Uncharacterized protein Tax=Candidatus Methylomirabilis oxyfera RepID=D5MM76_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBE67962.1}; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
PLM4_65_coex_sep16_scaffold_3261_13
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

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8616..9128
DNA (513bp) protein (171aa)
Uncharacterized protein Tax=Candidatus Methylomirabilis oxyfera RepID=D5MM77_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBE67963.1}; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
PLM4_65_coex_sep16_scaffold_3261_14
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

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9186..10259
DNA (1074bp) protein (358aa)
Uncharacterized protein Tax=Candidatus Methylomirabilis oxyfera RepID=D5MM79_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBE67965.1}; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
PLM4_65_coex_sep16_scaffold_3261_15
Acetonema longum, Acetonema, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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10247..11671
DNA (1425bp) protein (475aa)
cyanophycin synthetase (EC:6.3.2.29)
Cyanophycin synthetase Tax=Acetonema longum DSM 6540 RepID=F7NIK1_9FIRM
Cyanophycin synthetase {ECO:0000313|EMBL:EGO64147.1}; species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Acetonema.;" source="Acetonema longum DSM 6540.;"
PLM4_65_coex_sep16_scaffold_3261_16
unknown

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11768..11896
DNA (129bp) protein (43aa)

This feature has no annotations

PLM4_65_coex_sep16_scaffold_3261_17
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

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12093..13214
DNA (1122bp) protein (374aa)
Uncharacterized protein Tax=Candidatus Methylomirabilis oxyfera RepID=D5MM00_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBE70057.1}; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
PLM4_65_coex_sep16_scaffold_3261_18
RBG_16_Armatimonadetes_67_12_curated, Armatimonadetes, Bacteria

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13300..14904
DNA (1605bp) protein (535aa)
Putative uncharacterized protein bin=bin9_gal15 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin9_gal15 organism_group=GAL15
Tax=RBG_16_Armatimonadetes_67_12_curated
PLM4_65_coex_sep16_scaffold_3261_19
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

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15201..15377
DNA (177bp) protein (59aa)
Uncharacterized protein Tax=Candidatus Methylomirabilis oxyfera RepID=D5MM56_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBE67942.1}; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
PLM4_65_coex_sep16_scaffold_3261_20
Bradyrhizobium sp. STM 3809, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(15708..15863)
DNA (156bp) protein (52aa)
Uncharacterized protein Tax=Bradyrhizobium sp. STM 3809 RepID=H0TBA9_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:CCE03736.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. STM 3809.;"
OsmC-like protein
PLM4_65_coex_sep16_scaffold_3261_21
R_NC10_66_22, NC10, Bacteria

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16256..17077
DNA (822bp) protein (274aa)
Metallo-beta-lactamase superfamily protein bin=GWC2_Methylomirabilis_70_16 species=uncultured bacterium CSL144 genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
blaB; metallo-beta-lactamase family protein
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
PLM4_65_coex_sep16_scaffold_3261_22
unknown

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comp(16945..17238)
DNA (294bp) protein (98aa)

This feature has no annotations

PLM4_65_coex_sep16_scaffold_3261_23
Mitsuokella sp. oral taxon 131, Mitsuokella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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17415..17870
DNA (456bp) protein (152aa)
hypothetical protein Tax=Anaeromusa acidaminophila RepID=UPI00035E6A6D
Putative 5-methyltetrahydrofolate--homocysteine methyltransferase {ECO:0000313|EMBL:ERL25383.1}; species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Mitsuokella.;" source="Mitsuokella sp. oral taxon 131 str. W9106.;"
homocysteine S-methyltransferase
PLM4_65_coex_sep16_scaffold_3261_24
R_Rokubacteria_68_19, Rokubacteria, Bacteria

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17815..17967
DNA (153bp) protein (51aa)
methylcobalamin:homocysteine methyltransferase (EC:2.1.1.-) bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
cobalamin-independent synthase MetE
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
Displaying 24 items

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