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PLM4_65_coex_sep16_scaffold_478

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Displaying 29 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_coex_sep16_scaffold_478_1
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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1..279
DNA (279bp) protein (93aa)
Lipid A ABC exporter, fused ATPase and inner membrane subunits MsbA Tax=Geobacter uraniireducens (strain Rf4) RepID=A5G6H4_GEOUR
lipid A ABC exporter, fused ATPase and inner membrane subunits MsbA
Lipid A ABC exporter, fused ATPase and inner membrane subunits MsbA {ECO:0000313|EMBL:ABQ27392.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
PLM4_65_coex_sep16_scaffold_478_2
Geobacter sp. OR-1, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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279..989
DNA (711bp) protein (237aa)
hypothetical protein Tax=Geopsychrobacter electrodiphilus RepID=UPI0003670D54
Uncharacterized protein {ECO:0000313|EMBL:GAM07934.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter sp. OR-1.;"
hypothetical protein
PLM4_65_coex_sep16_scaffold_478_3
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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1020..2315
DNA (1296bp) protein (432aa)
Three-deoxy-D-manno-octulosonic-acid transferase domain protein Tax=Geobacter uraniireducens (strain Rf4) RepID=A5G6H2_GEOUR
3-deoxy-D-manno-octulosonic-acid transferase
Three-deoxy-D-manno-octulosonic-acid transferase domain protein {ECO:0000313|EMBL:ABQ27390.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
PLM4_65_coex_sep16_scaffold_478_4
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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2315..3385
DNA (1071bp) protein (357aa)
Tetraacyldisaccharide 4'-kinase {ECO:0000255|HAMAP-Rule:MF_00409}; EC=2.7.1.130 {ECO:0000255|HAMAP-Rule:MF_00409};; Lipid A 4'-kinase {ECO:0000255|HAMAP-Rule:MF_00409}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
Tetraacyldisaccharide 4'-kinase Tax=Geobacter uraniireducens (strain Rf4) RepID=LPXK_GEOUR
lpxK; tetraacyldisaccharide-1-phosphate 4'-kinase
PLM4_65_coex_sep16_scaffold_478_5
GWD2_Desulfuromonadales_61_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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3401..3577
DNA (177bp) protein (59aa)
UPF0434 protein Gmet_2346 Tax=Geobacter metallireducens RepID=Q39T53_GEOMG
hypothetical protein
Tax=GWD2_Desulfuromonadales_61_12_curated
PLM4_65_coex_sep16_scaffold_478_6
GWC2_Geobacteraceae_53_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(3612..4655)
DNA (1044bp) protein (348aa)
Putative glycosyltransferase Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AB55_GEMAT
glycosyl transferase family 9
Tax=GWC2_Geobacteraceae_53_11_curated
PLM4_65_coex_sep16_scaffold_478_7
GWC2_Geobacteraceae_58_44_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(4655..5464)
DNA (810bp) protein (270aa)
Uncharacterized protein Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AB54_GEMAT
lipopolysaccharide kinase
Tax=GWC2_Geobacteraceae_58_44_curated
PLM4_65_coex_sep16_scaffold_478_8
Geobacter metallireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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5984..7045
DNA (1062bp) protein (354aa)
ADP-heptose--lipopolysaccharide heptosyltransferase Tax=Geobacter metallireducens RepID=Q39T54_GEOMG
ADP-heptose--lipopolysaccharide heptosyltransferase
ADP-heptose--lipopolysaccharide heptosyltransferase {ECO:0000313|EMBL:ABB32570.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210).;"
PLM4_65_coex_sep16_scaffold_478_9
Geobacter pickeringii, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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7038..7808
DNA (771bp) protein (257aa)
glycosyl transferase family 2
Glycosyl transferase family 2 {ECO:0000313|EMBL:AJE03713.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter pickeringii.;"
Glycosyl transferase family 2 bin=GWC2_Geobacteraceae_55_20 species=Geobacter metallireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Geobacteraceae_55_20 organism_group=Deltaproteobacteria
PLM4_65_coex_sep16_scaffold_478_10
Geobacter pickeringii, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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7828..8757
DNA (930bp) protein (310aa)
Uncharacterized protein Tax=Geobacter metallireducens RepID=Q39T56_GEOMG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJE03712.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter pickeringii.;"
PLM4_65_coex_sep16_scaffold_478_11
Geobacter soli, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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8816..9922
DNA (1107bp) protein (369aa)
Glycosyltransferase, YqgM-like family Tax=Geobacter sulfurreducens RepID=D7AM74_GEOSK
Glycoside hydrolase {ECO:0000313|EMBL:KIE44134.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter soli.;"
YqgM-like family glycosyltransferase
PLM4_65_coex_sep16_scaffold_478_12
Geobacter metallireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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9976..10872
DNA (897bp) protein (299aa)
Glycosyltransferase Tax=Geobacter metallireducens RepID=Q39T57_GEOMG
glycosyltransferase
Glycosyltransferase {ECO:0000313|EMBL:ABB32567.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210).;"
PLM4_65_coex_sep16_scaffold_478_13
GWC2_Geobacteraceae_48_7_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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10994..11965
DNA (972bp) protein (324aa)
Glycosyl transferase family 9 bin=GWD2_Desulfuromonadales_54_10 species=Geobacter lovleyi genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Desulfuromonadales_54_10 organism_group=Deltaproteobacteria
glycosyl transferase family protein
Tax=GWC2_Geobacteraceae_48_7_curated
PLM4_65_coex_sep16_scaffold_478_14
Geobacter sp. M18, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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12159..13787
DNA (1629bp) protein (543aa)
AMP-dependent synthetase and ligase Tax=Geobacter sp. (strain M18) RepID=E8WKE7_GEOS8
AMP-dependent synthetase and ligase
AMP-dependent synthetase and ligase {ECO:0000313|EMBL:ADW12436.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter sp. (strain M18).;"
PLM4_65_coex_sep16_scaffold_478_15
Geobacter metallireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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13789..14028
DNA (240bp) protein (80aa)
Acyl carrier protein Tax=Geobacter metallireducens RepID=Q39T60_GEOMG
acpP-4; acyl carrier protein
Acyl carrier protein {ECO:0000313|EMBL:ABB32564.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210).;"
PLM4_65_coex_sep16_scaffold_478_16
Sulfurovum sp. AR, Sulfurovum, Epsilonproteobacteria, Proteobacteria, Bacteria

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14060..15010
DNA (951bp) protein (317aa)
Uncharacterized protein Tax=Sulfurovum sp. AR RepID=I2K5T4_9PROT
Uncharacterized protein {ECO:0000313|EMBL:EIF50586.1}; species="Bacteria; Proteobacteria; Epsilonproteobacteria; Sulfurovum.;" source="Sulfurovum sp. AR.;"
PLM4_65_coex_sep16_scaffold_478_17
Geobacter metallireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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15053..16522
DNA (1470bp) protein (490aa)
Membrane-bound O-acyltransferase, putative Tax=Geobacter metallireducens RepID=Q39T61_GEOMG
membrane-bound O-acyltransferase
Membrane-bound O-acyltransferase, putative {ECO:0000313|EMBL:ABB32563.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210).;"
PLM4_65_coex_sep16_scaffold_478_18
Geobacter metallireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16522..17583
DNA (1062bp) protein (354aa)
Uncharacterized protein Tax=Geobacter metallireducens RepID=Q39T62_GEOMG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABB32562.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210).;"
PLM4_65_coex_sep16_scaffold_478_19
Geobacter metallireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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17599..18426
DNA (828bp) protein (276aa)
Glycosyltransferase, putative Tax=Geobacter metallireducens RepID=Q39T63_GEOMG
glycosyltransferase
Glycosyltransferase, putative {ECO:0000313|EMBL:ABB32561.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210).;"
PLM4_65_coex_sep16_scaffold_478_20
Bacillus thuringiensis, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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18468..19559
DNA (1092bp) protein (364aa)
Methyltransferase Tax=Bacillus thuringiensis serovar huazhongensis BGSC 4BD1 RepID=C3H9R2_BACTU
Methyltransferase {ECO:0000313|EMBL:EEM80757.1}; species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus; Bacillus cereus group.;" source="Bacillus thuringiensis serovar huazhongensis BGSC 4BD1.;"
methyltransferase
PLM4_65_coex_sep16_scaffold_478_21
Geobacter metallireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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19596..20249
DNA (654bp) protein (218aa)
Acyltransferase, left-handed parallel beta-helix (Hexapeptide repeat) family Tax=Geobacter metallireducens RepID=Q39T66_GEOMG
acyltransferase
Acyltransferase, left-handed parallel beta-helix (Hexapeptide repeat) family {ECO:0000313|EMBL:ABB32558.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210).;"
PLM4_65_coex_sep16_scaffold_478_22
Geobacter metallireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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20236..21450
DNA (1215bp) protein (405aa)
dTDP-4-dehydro-6-deoxyglucose aminotransferase Tax=Geobacter metallireducens RepID=Q39T67_GEOMG
dTDP-4-dehydro-6-deoxyglucose aminotransferase
dTDP-4-dehydro-6-deoxyglucose aminotransferase {ECO:0000313|EMBL:ABB32557.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210).;"
PLM4_65_coex_sep16_scaffold_478_23
Geobacter soli, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21508..22548
DNA (1041bp) protein (347aa)
ADP-heptose--lipopolysaccharide heptosyltransferase Tax=Geobacter sulfurreducens RepID=D7ALE6_GEOSK
ADP-heptose--LPS heptosyltransferase {ECO:0000313|EMBL:KIE41814.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter soli.;"
ADP-heptose--LPS heptosyltransferase
PLM4_65_coex_sep16_scaffold_478_24
Geobacter pickeringii, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22580..23536
DNA (957bp) protein (319aa)
Uncharacterized protein Tax=Geobacter metallireducens RepID=Q39X61_GEOMG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJE02855.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter pickeringii.;"
PLM4_65_coex_sep16_scaffold_478_25
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23601..24584
DNA (984bp) protein (328aa)
UDP-galactose 4-epimerase {ECO:0000313|EMBL:ABQ27332.1}; EC=5.1.3.2 {ECO:0000313|EMBL:ABQ27332.1};; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
UDP-galactose 4-epimerase Tax=Geobacter uraniireducens (strain Rf4) RepID=A5G6B4_GEOUR
UDP-glucose 4-epimerase
PLM4_65_coex_sep16_scaffold_478_26
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24623..25501
DNA (879bp) protein (293aa)
Putative uncharacterized protein Tax=Geobacter uraniireducens (strain Rf4) RepID=A5G6A6_GEOUR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABQ27324.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
PLM4_65_coex_sep16_scaffold_478_27
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25611..26234
DNA (624bp) protein (208aa)
gmk; guanylate kinase (EC:2.7.4.8)
Guanylate kinase {ECO:0000256|HAMAP-Rule:MF_00328, ECO:0000256|SAAS:SAAS00021750}; EC=2.7.4.8 {ECO:0000256|HAMAP-Rule:MF_00328, ECO:0000256|SAAS:SAAS00036702};; GMP kinase {ECO:0000256|HAMAP-Rule:MF_00328}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
Guanylate kinase Tax=Geobacter uraniireducens (strain Rf4) RepID=A5G6A5_GEOUR
PLM4_65_coex_sep16_scaffold_478_28
Geobacter daltonii, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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26313..26522
DNA (210bp) protein (70aa)
DNA-directed RNA polymerase subunit omega {ECO:0000255|HAMAP-Rule:MF_00366}; Short=RNAP omega subunit {ECO:0000255|HAMAP-Rule:MF_00366};; EC=2.7.7.6 {ECO:0000255|HAMAP-Rule:MF_00366};; RNA polymerase omega subunit {ECO:0000255|HAMAP-Rule:MF_00366}; Transcriptase subunit omega {ECO:0000255|HAMAP-Rule:MF_00366}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter daltonii (strain DSM 22248 / JCM 15807 / FRC-32).;"
DNA-directed RNA polymerase subunit omega Tax=Geobacter daltonii (strain DSM 22248 / JCM 15807 / FRC-32) RepID=RPOZ_GEODF
DNA-directed RNA polymerase subunit omega
PLM4_65_coex_sep16_scaffold_478_29
Geobacter sp. OR-1, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26655..27986
DNA (1332bp) protein (444aa)
(p)ppGpp synthetase I SpoT/RelA (EC:2.7.6.5)
(P)ppGpp synthetase I, SpoT/RelA Tax=Geobacter sp. (strain M18) RepID=E8WJS7_GEOS8
GTP pyrophosphokinase {ECO:0000313|EMBL:GAM08206.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter sp. OR-1.;"
Displaying 29 items

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