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PLM4_65_coex_sep16_scaffold_1598

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_coex_sep16_scaffold_1598_1
Pelobacter propionicus, Pelobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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3..266
DNA (264bp) protein (88aa)
NADH ubiquinone oxidoreductase, 20 kDa subunit Tax=Pelobacter propionicus (strain DSM 2379) RepID=A1ASR2_PELPD
NADH ubiquinone oxidoreductase, 20 kDa subunit
NADH ubiquinone oxidoreductase, 20 kDa subunit {ECO:0000313|EMBL:ABL00383.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Pelobacteraceae; Pelobacter.;" source="Pelobacter propionicus (strain DSM 2379).;"
PLM4_65_coex_sep16_scaffold_1598_2
Geobacter sp. M18, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(404..1816)
DNA (1413bp) protein (471aa)
Glutamine synthetase {ECO:0000256|RuleBase:RU004356}; EC=6.3.1.2 {ECO:0000256|RuleBase:RU004356};; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter sp. (strain M18).;"
Glutamine synthetase Tax=Geobacter sp. (strain M18) RepID=E8WHU1_GEOS8
glutamine synthetase
PLM4_65_coex_sep16_scaffold_1598_3
Geobacter pickeringii, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(1935..2273)
DNA (339bp) protein (113aa)
Nitrogen regulatory protein P-II Tax=Geobacter metallireducens RepID=Q39VY9_GEOMG
nitrogen regulatory protein P-II 1
Nitrogen regulatory protein P-II 1 {ECO:0000313|EMBL:AJE03055.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter pickeringii.;"
PLM4_65_coex_sep16_scaffold_1598_4
Geobacter pickeringii, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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2645..3496
DNA (852bp) protein (284aa)
Zinc metalloendopeptidase, M23 family Tax=Geobacter sulfurreducens RepID=D7AJR7_GEOSK
peptidase M23
Peptidase M23 {ECO:0000313|EMBL:AJE03053.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter pickeringii.;"
PLM4_65_coex_sep16_scaffold_1598_5
GWB2_Geobacteraceae_52_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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3696..4937
DNA (1242bp) protein (414aa)
ErfK/YbiS/YcfS/YnhG family protein bin=GWB2_Geobacter-like_52_12 species=Pelobacter propionicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Geobacter-like_52_12 organism_group=Deltaproteobacteria organism_desc=Good
ErfK/YbiS/YcfS/YnhG family protein
Tax=GWB2_Geobacteraceae_52_12_curated
PLM4_65_coex_sep16_scaffold_1598_6
unknown

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5397..5756
DNA (360bp) protein (120aa)

This feature has no annotations

PLM4_65_coex_sep16_scaffold_1598_7
unknown

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6540..6854
DNA (315bp) protein (105aa)

This feature has no annotations

PLM4_65_coex_sep16_scaffold_1598_8
R_Nitrospirae_66_17, Nitrospirae, Bacteria

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comp(7130..7492)
DNA (363bp) protein (121aa)
Uncharacterized protein Tax=Geobacter metallireducens RepID=Q39Z63_GEOMG
hypothetical protein
Tax=RIFCSPHIGHO2_01_FULL_Nitrospirae_66_17_curated
PLM4_65_coex_sep16_scaffold_1598_9
unknown

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7526..7765
DNA (240bp) protein (80aa)

This feature has no annotations

PLM4_65_coex_sep16_scaffold_1598_10
RIFOXYD12_FULL_Deltaproteobacteria_57_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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8212..9309
DNA (1098bp) protein (366aa)
Uncharacterized protein Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1JWY3_DESAC
Tax=RIFOXYD12_FULL_Deltaproteobacteria_57_12_curated
PLM4_65_coex_sep16_scaffold_1598_11
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(9338..11869)
DNA (2532bp) protein (844aa)
ATP-dependent helicase HrpB Tax=Geobacter uraniireducens (strain Rf4) RepID=A5G3P7_GEOUR
ATP-dependent helicase HrpB {ECO:0000313|EMBL:ABQ26415.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
ATP-dependent helicase HrpB
PLM4_65_coex_sep16_scaffold_1598_12
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(11880..12557)
DNA (678bp) protein (226aa)
HAD-superfamily hydrolase, subfamily IA, variant 3 Tax=Geobacter uraniireducens (strain Rf4) RepID=A5G3P8_GEOUR
HAD family hydrolase
HAD-superfamily hydrolase, subfamily IA, variant 3 {ECO:0000313|EMBL:ABQ26416.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
PLM4_65_coex_sep16_scaffold_1598_13
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(12638..13450)
DNA (813bp) protein (271aa)
Phosphoesterase, PA-phosphatase related protein Tax=Geobacter uraniireducens (strain Rf4) RepID=A5G3P9_GEOUR
PA-phosphatase-like protein
Phosphoesterase, PA-phosphatase related protein {ECO:0000313|EMBL:ABQ26417.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
PLM4_65_coex_sep16_scaffold_1598_trna_2
unknown

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comp(13569..13640)
DNA (72bp)
transferRNA Glu
PLM4_65_coex_sep16_scaffold_1598_trna_1
unknown

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comp(13734..13805)
DNA (72bp)
transferRNA Gln
PLM4_65_coex_sep16_scaffold_1598_14
Geobacter metallireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(13842..14393)
DNA (552bp) protein (184aa)
2-oxoacid:ferredoxin oxidoreductase, gamma subunit Tax=Geobacter metallireducens RepID=Q39W29_GEOMG
vorC; 2-oxoacid:ferredoxin oxidoreductase subunit gamma
2-oxoacid:ferredoxin oxidoreductase, gamma subunit {ECO:0000313|EMBL:ABB31545.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210).;"
PLM4_65_coex_sep16_scaffold_1598_15
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(14563..15306)
DNA (744bp) protein (248aa)
Thiamine pyrophosphate enzyme domain protein TPP-binding protein Tax=Geobacter uraniireducens (strain Rf4) RepID=A5G3Q3_GEOUR
thiamine pyrophosphate binding domain-containing protein
Thiamine pyrophosphate enzyme domain protein TPP-binding protein {ECO:0000313|EMBL:ABQ26421.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
PLM4_65_coex_sep16_scaffold_1598_16
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15389..15940)
DNA (552bp) protein (184aa)
2-ketoisovalerate ferredoxin reductase (EC:1.2.7.7)
Pyruvate flavodoxin/ferredoxin oxidoreductase domain protein Tax=Geobacter uraniireducens (strain Rf4) RepID=A5G3Q4_GEOUR
Pyruvate flavodoxin/ferredoxin oxidoreductase domain protein {ECO:0000313|EMBL:ABQ26422.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
Displaying 18 items

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