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PLM4_65_coex_sep16_scaffold_1638

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_coex_sep16_scaffold_1638_1
Geobacter pickeringii, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(3..497)
DNA (495bp) protein (165aa)
Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex; EC=2.3.1.61;; 2-oxoglutarate dehydrogenase complex component E2 {ECO:0000256|RuleBase:RU361138}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter pickeringii.;"
2-oxoglutarate dehydrogenase, E2 subunit, dihydrolipoamide succinyltransferase Tax=Geobacter daltonii (strain DSM 22248 / JCM 15807 / FRC-32) RepID=B9M840_GEODF
dihydrolipoamide succinyltransferase
PLM4_65_coex_sep16_scaffold_1638_2
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(526..3264)
DNA (2739bp) protein (913aa)
sucA; 2-oxoglutarate dehydrogenase E1 component (EC:1.2.4.2)
2-oxoglutarate dehydrogenase E1 component {ECO:0000313|EMBL:ABQ25464.1}; EC=1.2.4.2 {ECO:0000313|EMBL:ABQ25464.1};; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
2-oxoglutarate dehydrogenase E1 component Tax=Geobacter uraniireducens (strain Rf4) RepID=A5GAD5_GEOUR
PLM4_65_coex_sep16_scaffold_1638_3
Geobacter pickeringii, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(3616..5700)
DNA (2085bp) protein (695aa)
Ribonuclease E {ECO:0000256|HAMAP-Rule:MF_00970}; Short=RNase E {ECO:0000256|HAMAP-Rule:MF_00970};; EC=3.1.26.12 {ECO:0000256|HAMAP-Rule:MF_00970};; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter pickeringii.;"
Ribonuclease E Tax=Geobacter sulfurreducens (strain ATCC 51573 / DSM 12127 / PCA) RepID=Q74EP1_GEOSL
ribonuclease E
PLM4_65_coex_sep16_scaffold_1638_4
RBG_19FT_COMBO_Thermodesulfovibrio_42_12_curated, Nitrospirae, Bacteria

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6168..7658
DNA (1491bp) protein (497aa)
Putative two-component sensor kinase bin=GWC2_CP_Nitrospirae-rel_42_7 species=planctomycete KSU-1 genus=unknown taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWC2_CP_Nitrospirae-rel_42_7 organism_group=Nitrospirae
histidine kinase
Tax=RBG_19FT_COMBO_Thermodesulfovibrio_42_12_curated
PLM4_65_coex_sep16_scaffold_1638_5
BJP_IG2157_Desulfuromonadales_56_134, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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7655..8734
DNA (1080bp) protein (360aa)
Response receiver-modulated cyclic diguanylate phosphodiesterase Tax=Geobacter sulfurreducens (strain DL-1 / KN400) RepID=D7AJX5_GEOSK
response receiver-modulated cyclic diguanylate phosphodiesterase
Tax=BJP_IG2157_Desulfuromonadales_56_134
PLM4_65_coex_sep16_scaffold_1638_6
GWC2_Geobacteraceae_58_44_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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8794..9510
DNA (717bp) protein (239aa)
hypothetical protein Tax=Geopsychrobacter electrodiphilus RepID=UPI00037DFCC4
response regulator receiver modulated PilZ sensor protein
Tax=GWC2_Geobacteraceae_58_44_curated
PLM4_65_coex_sep16_scaffold_1638_7
Geobacter pickeringii, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(9553..10101)
DNA (549bp) protein (183aa)
2-oxoglutarate ferredoxin oxidoreductase subunit gamma (EC:1.2.7.3)
2-oxoglutarate ferredoxin oxidoreductase subunit gamma {ECO:0000313|EMBL:AJE03424.1}; EC=1.2.7.3 {ECO:0000313|EMBL:AJE03424.1};; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter pickeringii.;"
2-oxoglutarate ferredoxin oxidoreductase, gamma subunit Tax=Geobacter uraniireducens (strain Rf4) RepID=A5G3K8_GEOUR
PLM4_65_coex_sep16_scaffold_1638_8
Geobacter sulfurreducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(10125..10946)
DNA (822bp) protein (274aa)
2-oxoglutarate:ferredoxin oxidoreductase, thiamin diphosphate-binding subunit Tax=Geobacter sulfurreducens RepID=D7AIQ4_GEOSK
korB; 2-oxoglutarate:ferredoxin oxidoreductase, thiamin diphosphate-binding subunit
2-oxoacid:ferredoxin oxidoreductase subunit beta {ECO:0000313|EMBL:AJY71651.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter sulfurreducens.;"
PLM4_65_coex_sep16_scaffold_1638_9
Geobacter pickeringii, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(10949..12082)
DNA (1134bp) protein (378aa)
2-oxoglutarate ferredoxin oxidoreductase subunit alpha (EC:1.2.7.3)
2-oxoglutarate ferredoxin oxidoreductase subunit alpha {ECO:0000313|EMBL:AJE03426.1}; EC=1.2.7.3 {ECO:0000313|EMBL:AJE03426.1};; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter pickeringii.;"
2-oxoglutarate:ferredoxin oxidoreductase, alpha subunit Tax=Geobacter sulfurreducens RepID=D7AIQ3_GEOSK
PLM4_65_coex_sep16_scaffold_1638_10
Geobacter pickeringii, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(12204..12401)
DNA (198bp) protein (66aa)
2-oxoglutarate:ferredoxin oxidoreductase, ferredoxin subunit Tax=Geobacter sulfurreducens RepID=D7AIQ2_GEOSK
tungsten formylmethanofuran dehydrogenase
Tungsten formylmethanofuran dehydrogenase {ECO:0000313|EMBL:AJE03427.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter pickeringii.;"
PLM4_65_coex_sep16_scaffold_1638_11
Geobacter soli, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(12554..13522)
DNA (969bp) protein (323aa)
Malate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00487, ECO:0000256|SAAS:SAAS00057904}; EC=1.1.1.37 {ECO:0000256|HAMAP-Rule:MF_00487, ECO:0000256|SAAS:SAAS00057904};; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter soli.;"
Malate dehydrogenase Tax=Geobacter sulfurreducens RepID=MDH_GEOSL
mdh; malate dehydrogenase
PLM4_65_coex_sep16_scaffold_1638_12
RBG_16_Chloroflexi_63_12_curated, Chloroflexi, Bacteria

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comp(13559..14773)
DNA (1215bp) protein (405aa)
Isocitrate dehydrogenase (NADP) bin=GWB2_Pelobacter_53_15 species=Pelobacter propionicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Pelobacter_53_15 organism_group=Deltaproteobacteria organism_desc=Good
isocitrate dehydrogenase
Tax=RBG_16_Chloroflexi_63_12_curated
PLM4_65_coex_sep16_scaffold_1638_13
unknown

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14895..15035
DNA (141bp) protein (47aa)

This feature has no annotations

Displaying 13 items

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