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PLM4_65_coex_sep16_scaffold_2498

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Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_coex_sep16_scaffold_2498_1
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..1772)
DNA (1770bp) protein (590aa)
hypothetical protein Tax=Hymenobacter norwichensis RepID=UPI0003B344DF
hypothetical protein
Tax=RBG_16_Betaproteobacteria_64_18_curated
PLM4_65_coex_sep16_scaffold_2498_2
GWC2_Geobacteraceae_53_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1832..2167)
DNA (336bp) protein (112aa)
Tax=GWC2_Geobacteraceae_53_11_curated
PLM4_65_coex_sep16_scaffold_2498_3
Geobacter sp. M18, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2461..3594)
DNA (1134bp) protein (378aa)
Putative uncharacterized protein Tax=Geobacter sp. (strain M18) RepID=E8WLE4_GEOS8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADW12526.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter sp. (strain M18).;"
PLM4_65_coex_sep16_scaffold_2498_4
GWD2_Desulfuromonadales_54_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4019..4315
DNA (297bp) protein (99aa)
Flagellar basal body rod protein bin=GWD2_Desulfuromonadales_54_10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_Desulfuromonadales_54_10 organism_group=Deltaproteobacteria
hypothetical protein
Tax=GWD2_Desulfuromonadales_54_10_curated
PLM4_65_coex_sep16_scaffold_2498_5
RIFOXYD12_FULL_Deltaproteobacteria_53_23_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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4487..4729
DNA (243bp) protein (81aa)
CopG-like DNA-binding bin=GWC2_Methylomirabilis_70_16 species=Chlorobium ferrooxidans genus=Chlorobium taxon_order=Chlorobiales taxon_class=Chlorobia phylum=Chlorobi tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
CopG family transcriptional regulator
Tax=RIFOXYD12_FULL_Deltaproteobacteria_53_23_curated
PLM4_65_coex_sep16_scaffold_2498_6
RIFOXYD12_FULL_Deltaproteobacteria_53_23_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4714..5052
DNA (339bp) protein (113aa)
PemK-like protein bin=GWD2_Deltaproteobacteria_55_8 species=Nitrosococcus oceani genus=Nitrosococcus taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
MazF family transcriptional regulator
Tax=RIFOXYD12_FULL_Deltaproteobacteria_53_23_curated
PLM4_65_coex_sep16_scaffold_2498_7
Geobacter sp. OR-1, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5228..6460)
DNA (1233bp) protein (411aa)
Aspartokinase {ECO:0000256|RuleBase:RU003448, ECO:0000313|EMBL:GAM10667.1}; EC=2.7.2.4 {ECO:0000256|RuleBase:RU003448};; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter sp. OR-1.;"
aspartate kinase (EC:2.7.2.4)
Aspartokinase Tax=Geobacter uraniireducens (strain Rf4) RepID=A5G3X9_GEOUR
PLM4_65_coex_sep16_scaffold_2498_8
GWC2_Geobacteraceae_58_44_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6576..7037)
DNA (462bp) protein (154aa)
Uncharacterized protein family UPF0079, ATPase Tax=Geobacter sp. (strain M18) RepID=E8WM82_GEOS8
hypothetical protein
Tax=GWC2_Geobacteraceae_58_44_curated
PLM4_65_coex_sep16_scaffold_2498_9
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7039..7494)
DNA (456bp) protein (152aa)
CBS domain containing protein Tax=Geobacter uraniireducens (strain Rf4) RepID=A5G3Y1_GEOUR
hypothetical protein
CBS domain containing protein {ECO:0000313|EMBL:ABQ26499.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
PLM4_65_coex_sep16_scaffold_2498_10
Geobacter metallireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7576..9141)
DNA (1566bp) protein (522aa)
ATP-binding protein YjeF Tax=Geobacter metallireducens RepID=Q39UG2_GEOMG
yjeF; ATP-binding protein YjeF
ATP-binding protein YjeF {ECO:0000313|EMBL:ABB32112.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210).;"
PLM4_65_coex_sep16_scaffold_2498_11
Geobacter sp. M21, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9138..9518)
DNA (381bp) protein (127aa)
Holo-[acyl-carrier-protein] synthase {ECO:0000255|HAMAP-Rule:MF_00101}; Short=Holo-ACP synthase {ECO:0000255|HAMAP-Rule:MF_00101};; EC=2.7.8.7 {ECO:0000255|HAMAP-Rule:MF_00101};; 4'-phosphopantetheinyl transferase AcpS {ECO:0000255|HAMAP-Rule:MF_00101}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter sp. (strain M21).;"
Holo-[acyl-carrier-protein] synthase Tax=Geobacter uraniireducens (strain Rf4) RepID=A5G3Y3_GEOUR
acpS; 4'-phosphopantetheinyl transferase
PLM4_65_coex_sep16_scaffold_2498_12
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9647..10366)
DNA (720bp) protein (240aa)
Pyridoxine 5'-phosphate synthase {ECO:0000255|HAMAP-Rule:MF_00279}; Short=PNP synthase {ECO:0000255|HAMAP-Rule:MF_00279};; EC=2.6.99.2 {ECO:0000255|HAMAP-Rule:MF_00279};; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
Pyridoxine 5'-phosphate synthase Tax=Geobacter uraniireducens (strain Rf4) RepID=PDXJ_GEOUR
pyridoxine 5'-phosphate synthase
PLM4_65_coex_sep16_scaffold_2498_13
Geobacter metallireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10369..11688)
DNA (1320bp) protein (440aa)
Phosphoglucosamine mutase {ECO:0000255|HAMAP-Rule:MF_01554}; EC=5.4.2.10 {ECO:0000255|HAMAP-Rule:MF_01554};; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210).;"
Phosphoglucosamine mutase Tax=Geobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210) RepID=GLMM_GEOMG
glmM; phosphoglucosamine mutase
PLM4_65_coex_sep16_scaffold_2498_14
Geobacter metallireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11936..12322)
DNA (387bp) protein (129aa)
YbbR domain protein Tax=Geobacter metallireducens RepID=Q39UF8_GEOMG
YbbR domain-containing protein
YbbR domain protein {ECO:0000313|EMBL:ABB32116.2}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210).;"
PLM4_65_coex_sep16_scaffold_2498_15
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12319..13095)
DNA (777bp) protein (259aa)
Putative uncharacterized protein Tax=Geobacter uraniireducens (strain Rf4) RepID=A5G538_GEOUR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABQ26906.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
PLM4_65_coex_sep16_scaffold_2498_16
GWD2_Desulfuromonadales_54_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13147..14355)
DNA (1209bp) protein (403aa)
Dihydropteroate synthase bin=GWD2_Desulfuromonadales_54_10 species=Pelobacter propionicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Desulfuromonadales_54_10 organism_group=Deltaproteobacteria
dihydropteroate synthase
Tax=GWD2_Desulfuromonadales_54_10_curated
PLM4_65_coex_sep16_scaffold_2498_17
Geobacter daltonii, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14355..16190)
DNA (1836bp) protein (612aa)
ATP-dependent zinc metalloprotease FtsH {ECO:0000256|HAMAP-Rule:MF_01458}; EC=3.4.24.- {ECO:0000256|HAMAP-Rule:MF_01458};; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter daltonii (strain DSM 22248 / JCM 15807 / FRC-32).;"
ATP-dependent metalloprotease FtsH (EC:3.6.4.3)
ATP-dependent zinc metalloprotease FtsH Tax=Geobacter daltonii (strain DSM 22248 / JCM 15807 / FRC-32) RepID=B9M5K7_GEODF
PLM4_65_coex_sep16_scaffold_2498_18
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16318..17697)
DNA (1380bp) protein (460aa)
tRNA(Ile)-lysidine synthase {ECO:0000256|HAMAP-Rule:MF_01161}; EC=6.3.4.19 {ECO:0000256|HAMAP-Rule:MF_01161};; tRNA(Ile)-2-lysyl-cytidine synthase {ECO:0000256|HAMAP-Rule:MF_01161}; tRNA(Ile)-lysidine synthetase {ECO:0000256|HAMAP-Rule:MF_01161}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
tRNA(Ile)-lysidine synthase Tax=Geobacter uraniireducens (strain Rf4) RepID=A5G541_GEOUR
tRNA(Ile)-lysidine synthetase
PLM4_65_coex_sep16_scaffold_2498_19
Grimontia sp. AD028, Grimontia, Vibrionales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18024..19448
DNA (1425bp) protein (475aa)
Non-phosphorylating glyceraldehyde-3-phosphate dehydrogenase (NADP) Tax=Grimontia sp. AK16 RepID=R1GTL8_9GAMM
Aldehyde dehydrogenase {ECO:0000313|EMBL:KKD60644.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae; Grimontia.;" source="Grimontia sp. AD028.;"
aldehyde dehydrogenase
Displaying 19 items

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