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PLM4_65_coex_sep16_scaffold_5695

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_coex_sep16_scaffold_5695_1
Candidatus Brocadia sinica, Candidatus Brocadia, Candidatus Brocadiales, Planctomycetia, Planctomycetes, Bacteria

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comp(3..236)
DNA (234bp) protein (78aa)
atpI1; protein AtpI1 (EC:3.6.3.14)
Putative uncharacterized protein Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1PVR5_9BACT
ATP synthase protein I {ECO:0000313|EMBL:GAN31962.1}; species="Bacteria; Planctomycetes; Planctomycetia; Candidatus Brocadiales; Candidatus Brocadiaceae; Candidatus Brocadia.;" source="Candidatus Brocadia sinica JPN1.;"
PLM4_65_coex_sep16_scaffold_5695_2
Candidatus Brocadia sinica, Candidatus Brocadia, Candidatus Brocadiales, Planctomycetia, Planctomycetes, Bacteria

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comp(236..640)
DNA (405bp) protein (135aa)
Similar to ATPC gene encoding subunit epsilon of ATP synthase Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1PVR6_9BACT
F0F1 ATP synthase subunit epsilon {ECO:0000313|EMBL:GAN31963.1}; species="Bacteria; Planctomycetes; Planctomycetia; Candidatus Brocadiales; Candidatus Brocadiaceae; Candidatus Brocadia.;" source="Candidatus Brocadia sinica JPN1.;"
putative ATP synthase delta/epsilon subunit
PLM4_65_coex_sep16_scaffold_5695_3
Candidatus Kuenenia stuttgartiensis, Candidatus Kuenenia, Candidatus Brocadiales, Planctomycetia, Planctomycetes, Bacteria

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comp(637..2028)
DNA (1392bp) protein (464aa)
ATP synthase subunit beta {ECO:0000256|HAMAP-Rule:MF_01347}; EC=3.6.3.14 {ECO:0000256|HAMAP-Rule:MF_01347};; ATP synthase F1 sector subunit beta {ECO:0000256|HAMAP-Rule:MF_01347}; F-ATPase subunit beta {ECO:0000256|HAMAP-Rule:MF_01347}; species="Bacteria; Planctomycetes; Planctomycetia; Candidatus Brocadiales; Candidatus Brocadiaceae; Candidatus Kuenenia.;" source="Candidatus Kuenenia stuttgartiensis.;"
atpD; ATP synthase F0F1 subunit beta (EC:3.6.3.14)
ATP synthase subunit beta Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1PVR7_9BACT
PLM4_65_coex_sep16_scaffold_5695_4
RBG_13_Nitrospirae_41_22_curated, Nitrospirae, Bacteria

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comp(2156..2611)
DNA (456bp) protein (152aa)
CBS domain containing membrane protein bin=GWE2_OD1_46_68 species=GWE2_OD1_46_68 genus=GWE2_OD1_46_68 taxon_order=GWE2_OD1_46_68 taxon_class=GWE2_OD1_46_68 phylum=OD1 tax=GWE2_OD1_46_68 organism_group=OD1 (Parcubacteria)
signal transduction protein
Tax=RBG_13_Nitrospirae_41_22_curated
PLM4_65_coex_sep16_scaffold_5695_trna_2
unknown

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comp(3480..3552)
DNA (73bp)
transferRNA Val
PLM4_65_coex_sep16_scaffold_5695_trna_1
unknown

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comp(3565..3638)
DNA (74bp)
transferRNA Asp
PLM4_65_coex_sep16_scaffold_5695_5
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(3836..6253)
DNA (2418bp) protein (806aa)
ATP-dependent protease La (EC:3.4.21.53)
Lon protease {ECO:0000256|HAMAP-Rule:MF_01973, ECO:0000256|PIRNR:PIRNR001174}; EC=3.4.21.53 {ECO:0000256|HAMAP-Rule:MF_01973, ECO:0000256|PIRNR:PIRNR001174};; ATP-dependent protease La {ECO:0000256|HAMAP-Rule:MF_01973}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
Lon protease Tax=Geobacter uraniireducens (strain Rf4) RepID=A5GFA2_GEOUR
PLM4_65_coex_sep16_scaffold_5695_6
Geobacter sp. OR-1, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(6267..7100)
DNA (834bp) protein (278aa)
ATP-dependent Clp protease ATP-binding subunit ClpX Tax=Geobacter sulfurreducens (strain ATCC 51573 / DSM 12127 / PCA) RepID=CLPX_GEOSL
ATP-dependent Clp protease ATP-binding subunit ClpX {ECO:0000256|HAMAP-Rule:MF_00175, ECO:0000256|SAAS:SAAS00063387}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter sp. OR-1.;"
Clp protease ATP-binding protein
PLM4_65_coex_sep16_scaffold_5695_7
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(7057..7536)
DNA (480bp) protein (160aa)
ATP-dependent Clp protease ATP-binding subunit ClpX Tax=Geobacter uraniireducens (strain Rf4) RepID=CLPX_GEOUR
clpX; ATP-dependent protease ATP-binding subunit ClpX
ATP-dependent Clp protease ATP-binding subunit ClpX {ECO:0000255|HAMAP-Rule:MF_00175}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
PLM4_65_coex_sep16_scaffold_5695_8
Geobacter daltonii, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(7533..8132)
DNA (600bp) protein (200aa)
clpP; ATP-dependent Clp protease proteolytic subunit (EC:3.4.21.92)
ATP-dependent Clp protease proteolytic subunit {ECO:0000255|HAMAP-Rule:MF_00444}; EC=3.4.21.92 {ECO:0000255|HAMAP-Rule:MF_00444};; Endopeptidase Clp {ECO:0000255|HAMAP-Rule:MF_00444}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter daltonii (strain DSM 22248 / JCM 15807 / FRC-32).;"
ATP-dependent Clp protease proteolytic subunit Tax=Geobacter daltonii (strain DSM 22248 / JCM 15807 / FRC-32) RepID=CLPP_GEODF
PLM4_65_coex_sep16_scaffold_5695_9
Geobacter daltonii, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(8196..9065)
DNA (870bp) protein (290aa)
Trigger factor {ECO:0000255|HAMAP-Rule:MF_00303}; Short=TF {ECO:0000255|HAMAP-Rule:MF_00303};; EC=5.2.1.8 {ECO:0000255|HAMAP-Rule:MF_00303};; PPIase {ECO:0000255|HAMAP-Rule:MF_00303}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter daltonii (strain DSM 22248 / JCM 15807 / FRC-32).;"
Trigger factor Tax=Geobacter daltonii (strain DSM 22248 / JCM 15807 / FRC-32) RepID=TIG_GEODF
trigger factor
Displaying 11 items

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