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PLM4_65_coex_sep16_scaffold_12913

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_coex_sep16_scaffold_12913_1
Geobacter daltonii, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(3..608)
DNA (606bp) protein (202aa)
Sulfate adenylyltransferase subunit 2 {ECO:0000255|HAMAP-Rule:MF_00064}; EC=2.7.7.4 {ECO:0000255|HAMAP-Rule:MF_00064};; ATP-sulfurylase small subunit {ECO:0000255|HAMAP-Rule:MF_00064}; Sulfate adenylate transferase {ECO:0000255|HAMAP-Rule:MF_00064}; Short=SAT {ECO:0000255|HAMAP-Rule:MF_00064};; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter daltonii (strain DSM 22248 / JCM 15807 / FRC-32).;"
Sulfate adenylyltransferase subunit 2 Tax=Geobacter daltonii (strain DSM 22248 / JCM 15807 / FRC-32) RepID=CYSD_GEODF
sulfate adenylyltransferase subunit 2
PLM4_65_coex_sep16_scaffold_12913_2
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(717..1409)
DNA (693bp) protein (231aa)
adenylylsulfate reductase (EC:1.8.4.8)
Phosphoadenylylsulfate reductase (Thioredoxin) {ECO:0000313|EMBL:ABQ28082.1}; EC=1.8.4.8 {ECO:0000313|EMBL:ABQ28082.1};; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
Phosphoadenylylsulfate reductase (Thioredoxin) Tax=Geobacter uraniireducens (strain Rf4) RepID=A5G8G4_GEOUR
PLM4_65_coex_sep16_scaffold_12913_3
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(1472..2920)
DNA (1449bp) protein (483aa)
Anion transporter Tax=Geobacter uraniireducens (strain Rf4) RepID=A5G8G5_GEOUR
anion transporter
Anion transporter {ECO:0000313|EMBL:ABQ28083.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
PLM4_65_coex_sep16_scaffold_12913_4
Geobacter daltonii, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(2920..3726)
DNA (807bp) protein (269aa)
Uncharacterized protein Tax=Geobacter daltonii (strain DSM 22248 / JCM 15807 / FRC-32) RepID=B9M194_GEODF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACM19164.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter daltonii (strain DSM 22248 / JCM 15807 / FRC-32).;"
PLM4_65_coex_sep16_scaffold_12913_5
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(3817..4044)
DNA (228bp) protein (76aa)
Redox protein regulator of disulfide bond formation-like protein Tax=Geobacter uraniireducens (strain Rf4) RepID=A5G8G8_GEOUR
redox protein regulator of disulfide bond formation-like protein
Redox protein regulator of disulfide bond formation-like protein {ECO:0000313|EMBL:ABQ28086.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
PLM4_65_coex_sep16_scaffold_12913_6
GWC2_Nitrospirae_56_14_curated, Nitrospirae, Bacteria

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comp(4163..4432)
DNA (270bp) protein (90aa)
Nitrite and sulphite reductase 4Fe-4S region bin=GWC2_Nitrospirae-rel_56_14 species=Geobacter sp. genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Nitrospirae-rel_56_14 organism_group=Nitrospirae organism_desc=Pretty good; based on recA
nitrite and sulfite reductase 4Fe-4S region
Tax=GWC2_Nitrospirae_56_14_curated
PLM4_65_coex_sep16_scaffold_12913_7
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(4443..5078)
DNA (636bp) protein (212aa)
Nitrite and sulphite reductase 4Fe-4S region Tax=Geobacter uraniireducens (strain Rf4) RepID=A5G8G9_GEOUR
nitrite and sulfite reductase 4Fe-4S region
Nitrite and sulphite reductase 4Fe-4S region {ECO:0000313|EMBL:ABQ28087.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
PLM4_65_coex_sep16_scaffold_12913_8
Geobacter pickeringii, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(5350..6204)
DNA (855bp) protein (285aa)
RNA polymerase sigma factor Tax=Geobacter uraniireducens (strain Rf4) RepID=A5G8H8_GEOUR
RNA polymerase sigma 70
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter pickeringii.;"
PLM4_65_coex_sep16_scaffold_12913_9
Geobacter pickeringii, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(6343..6600)
DNA (258bp) protein (86aa)
PilZ domain protein Tax=Geobacter sulfurreducens RepID=D7ALY8_GEOSK
pilus assembly protein PilZ
Pilus assembly protein PilZ {ECO:0000313|EMBL:AJE04630.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter pickeringii.;"
PLM4_65_coex_sep16_scaffold_12913_10
Geobacter pickeringii, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(6796..7479)
DNA (684bp) protein (228aa)
Pyridoxal-5'-phosphate-dependent enzyme, class III Tax=Geobacter sulfurreducens RepID=D7AKS6_GEOSK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJE04075.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter pickeringii.;"
PLM4_65_coex_sep16_scaffold_12913_11
Geobacter soli, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(7489..8103)
DNA (615bp) protein (205aa)
Maf-like protein GSU2545 Tax=Geobacter sulfurreducens RepID=Y2545_GEOSL
Maf-like protein SE37_02660 {ECO:0000256|HAMAP-Rule:MF_00528}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter soli.;"
maf; nucleotide/nucleic acid-binding septum formation-inhibiting protein
PLM4_65_coex_sep16_scaffold_12913_12
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(8122..8325)
DNA (204bp) protein (68aa)
Putative uncharacterized protein Tax=Geobacter uraniireducens (strain Rf4) RepID=A5G7S2_GEOUR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABQ27840.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
PLM4_65_coex_sep16_scaffold_12913_13
Geobacter pickeringii, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(8337..8639)
DNA (303bp) protein (101aa)
Methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase TrmFO {ECO:0000256|HAMAP-Rule:MF_01037, ECO:0000256|SAAS:SAAS00089752}; EC=2.1.1.74 {ECO:0000256|HAMAP-Rule:MF_01037, ECO:0000256|SAAS:SAAS00089759};; Folate-dependent tRNA (uracil-5-)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01037}; Folate-dependent tRNA(M-5-U54)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01037}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter pickeringii.;"
gid; tRNA (uracil-5-)-methyltransferase
Methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase TrmFO bin=GWC2_Geobacteraceae_55_20 species=Pelobacter propionicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Geobacteraceae_55_20 organism_group=Deltaproteobacteria
Displaying 13 items

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