ggKbase home page

PLM4_65_coex_sep16_scaffold_14059

Search features with annotation key words

Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_coex_sep16_scaffold_14059_1
uncultured Desulfobacterium sp., Desulfobacterium, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2..2239)
DNA (2238bp) protein (746aa)
Probable phosphoketolase {ECO:0000256|HAMAP-Rule:MF_01403}; EC=4.1.2.- {ECO:0000256|HAMAP-Rule:MF_01403};; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobacteraceae; Desulfobacterium; environmental samples.;" source="uncultured Desulfobacterium sp.;"
putative phosphoketolase (EC:4.1.2.22)
Probable phosphoketolase Tax=uncultured Desulfobacterium sp. RepID=E1YMH1_9DELT
PLM4_65_coex_sep16_scaffold_14059_2
CG_Arma_02, Armatimonadetes, Bacteria

Not on your lists

comp(2306..3049)
DNA (744bp) protein (248aa)
PRC-barrel domain protein Tax=Methylomicrobium alcaliphilum (strain DSM 19304 / NCIMB 14124 / VKM B-2133 / 20Z) RepID=G4SX93_META2
PRC-barrel domain-containing protein
Tax=CG_Arma_02
PLM4_65_coex_sep16_scaffold_14059_3
unknown

Not on your lists

3255..3458
DNA (204bp) protein (68aa)

This feature has no annotations

PLM4_65_coex_sep16_scaffold_14059_4
RBG_16_Deltaproteobacteria_49_23_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3657..3947
DNA (291bp) protein (97aa)
Putative uncharacterized protein bin=GWC2_Syntrophus__56_31 species=Mariprofundus ferrooxydans genus=Mariprofundus taxon_order=Mariprofundales taxon_class=Zetaproteobacteria phylum=Proteobacteria tax=GWC2_Syntrophus__56_31 organism_group=Deltaproteobacteria organism_desc=Good +
hypothetical protein
Tax=RBG_16_Deltaproteobacteria_49_23_curated
PLM4_65_coex_sep16_scaffold_14059_5
Geobacter daltonii, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4151..5497)
DNA (1347bp) protein (449aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter daltonii (strain DSM 22248 / JCM 15807 / FRC-32).;"
PAS/PAC sensor signal transduction histidine kinase Tax=Geobacter daltonii (strain DSM 22248 / JCM 15807 / FRC-32) RepID=B9M7M0_GEODF
PAS/PAC sensor signal transduction histidine kinase
PLM4_65_coex_sep16_scaffold_14059_6
GWD2_Desulfuromonadales_54_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5629..6384)
DNA (756bp) protein (252aa)
Transport-associated bin=GWD2_Desulfuromonadales_54_10 species=ACD79 genus=ACD79 taxon_order=ACD79 taxon_class=ACD79 phylum=Clamydiae tax=GWD2_Desulfuromonadales_54_10 organism_group=Deltaproteobacteria
transport-associated protein
Tax=GWD2_Desulfuromonadales_54_10_curated
PLM4_65_coex_sep16_scaffold_14059_7
GWA2_Deltaproteobacteria_65_63_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6531..6710)
DNA (180bp) protein (60aa)
CsbD family protein bin=GWB2_Deltaproteobacteria_65_81 species=Geobacter uraniireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Deltaproteobacteria_65_81 organism_group=Deltaproteobacteria organism_desc=Good +
CsbD family protein
Tax=GWA2_Deltaproteobacteria_65_63_curated
PLM4_65_coex_sep16_scaffold_14059_8
unknown

Not on your lists

comp(6768..7007)
DNA (240bp) protein (80aa)

This feature has no annotations

PLM4_65_coex_sep16_scaffold_14059_9
Geobacter sp. OR-1, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7325..7615)
DNA (291bp) protein (97aa)
Uncharacterized protein {ECO:0000313|EMBL:GAM11473.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter sp. OR-1.;"
Uncharacterized protein bin=GWF2_Geobacter_54_21 species=unknown genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Geobacter_54_21 organism_group=Deltaproteobacteria organism_desc=Good
PLM4_65_coex_sep16_scaffold_14059_10
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8101..8301)
DNA (201bp) protein (67aa)
Putative uncharacterized protein Tax=Geobacter uraniireducens (strain Rf4) RepID=A5GC49_GEOUR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABQ24851.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
Displaying 10 items

View Taxonomy