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PLM4_65_coex_sep16_scaffold_3056

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_coex_sep16_scaffold_3056_1
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(21..2051)
DNA (2031bp) protein (677aa)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
UvrD/REP helicase Tax=Geobacter uraniireducens (strain Rf4) RepID=A5GA79_GEOUR
UvrD/REP helicase
PLM4_65_coex_sep16_scaffold_3056_2
Geobacter sp. M18, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(2507..3259)
DNA (753bp) protein (251aa)
Sporulation domain-containing protein Tax=Geobacter sp. (strain M18) RepID=E8WIA9_GEOS8
sporulation domain-containing protein
Sporulation domain-containing protein {ECO:0000313|EMBL:ADW13410.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter sp. (strain M18).;"
PLM4_65_coex_sep16_scaffold_3056_3
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(3273..4958)
DNA (1686bp) protein (562aa)
argS; arginyl-tRNA synthetase (EC:6.1.1.19)
Arginine--tRNA ligase {ECO:0000255|HAMAP-Rule:MF_00123}; EC=6.1.1.19 {ECO:0000255|HAMAP-Rule:MF_00123};; Arginyl-tRNA synthetase {ECO:0000255|HAMAP-Rule:MF_00123}; Short=ArgRS {ECO:0000255|HAMAP-Rule:MF_00123};; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
Arginine--tRNA ligase Tax=Geobacter uraniireducens (strain Rf4) RepID=SYR_GEOUR
PLM4_65_coex_sep16_scaffold_3056_4
Geobacter metallireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(5006..5341)
DNA (336bp) protein (112aa)
Septum formation initiator family protein Tax=Geobacter metallireducens RepID=Q39VQ8_GEOMG
divIC; septum formation initiator family protein
Septum formation initiator family protein {ECO:0000313|EMBL:ABB31666.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210).;"
PLM4_65_coex_sep16_scaffold_3056_5
Geobacter daltonii, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(5355..6296)
DNA (942bp) protein (314aa)
NAD-dependent epimerase/dehydratase Tax=Geobacter daltonii (strain DSM 22248 / JCM 15807 / FRC-32) RepID=B9M2S5_GEODF
NAD-dependent epimerase/dehydratase
UDP-glucuronate decarboxylase {ECO:0000313|EMBL:ACM21271.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter daltonii (strain DSM 22248 / JCM 15807 / FRC-32).;"
PLM4_65_coex_sep16_scaffold_3056_6
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(6324..7676)
DNA (1353bp) protein (451aa)
UDP-glucose 6-dehydrogenase (EC:1.1.1.22)
UDP-glucose 6-dehydrogenase {ECO:0000313|EMBL:ABQ26487.1}; EC=1.1.1.22 {ECO:0000313|EMBL:ABQ26487.1};; Flags: Precursor;; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
UDP-glucose 6-dehydrogenase Tax=Geobacter uraniireducens (strain Rf4) RepID=A5G3W9_GEOUR
PLM4_65_coex_sep16_scaffold_3056_7
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(7787..8620)
DNA (834bp) protein (278aa)
ksgA; dimethyladenosine transferase (EC:2.1.1.48)
Ribosomal RNA small subunit methyltransferase A {ECO:0000256|HAMAP-Rule:MF_00607, ECO:0000256|SAAS:SAAS00015019}; EC=2.1.1.182 {ECO:0000256|HAMAP-Rule:MF_00607, ECO:0000256|SAAS:SAAS00015085};; 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase {ECO:0000256|HAMAP-Rule:MF_00607}; 16S rRNA dimethyladenosine transferase {ECO:0000256|HAMAP-Rule:MF_00607}; 16S rRNA dimethylase {ECO:0000256|HAMAP-Rule:MF_00607}; S-adenosylmethionine-6-N', N'-adenosyl(rRNA) dimethyltransferase {ECO:0000256|HAMAP-Rule:MF_00607}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
Ribosomal RNA small subunit methyltransferase A Tax=Geobacter uraniireducens (strain Rf4) RepID=A5G3X0_GEOUR
PLM4_65_coex_sep16_scaffold_3056_8
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(8621..9643)
DNA (1023bp) protein (341aa)
putative DNA-binding/iron metalloprotein/AP endonuclease (EC:3.4.24.57)
tRNA N6-adenosine threonylcarbamoyltransferase {ECO:0000255|HAMAP-Rule:MF_01445}; EC=2.3.1.234 {ECO:0000255|HAMAP-Rule:MF_01445};; N6-L-threonylcarbamoyladenine synthase {ECO:0000255|HAMAP-Rule:MF_01445}; Short=t(6)A synthase {ECO:0000255|HAMAP-Rule:MF_01445};; t(6)A37 threonylcarbamoyladenosine biosynthesis protein TsaD {ECO:0000255|HAMAP-Rule:MF_01445}; tRNA threonylcarbamoyladenosine biosynthesis protein TsaD {ECO:0000255|HAMAP-Rule:MF_01445}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
tRNA N6-adenosine threonylcarbamoyltransferase Tax=Geobacter uraniireducens (strain Rf4) RepID=TSAD_GEOUR
PLM4_65_coex_sep16_scaffold_3056_9
Geobacter pickeringii, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(10050..10217)
DNA (168bp) protein (56aa)
PhoH-related ATPase Tax=Geobacter metallireducens RepID=Q39W36_GEOMG
PhoH
PhoH {ECO:0000313|EMBL:AJE03027.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter pickeringii.;"
Displaying 9 items

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