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PLM4_65_coex_sep16_scaffold_3563

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_coex_sep16_scaffold_3563_1
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(3..1241)
DNA (1239bp) protein (413aa)
Two component, sigma-54 specific, transcriptional regulator, Fis family Tax=Geobacter uraniireducens (strain Rf4) RepID=A5G7L1_GEOUR
two component sigma-54 specific Fis family transcriptional regulator
Two component, sigma-54 specific, transcriptional regulator, Fis family {ECO:0000313|EMBL:ABQ27779.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
PLM4_65_coex_sep16_scaffold_3563_2
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(1234..2148)
DNA (915bp) protein (305aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; Flags: Precursor;; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
Integral membrane sensor signal transduction histidine kinase Tax=Geobacter uraniireducens (strain Rf4) RepID=A5G7L0_GEOUR
integral membrane sensor signal transduction histidine kinase
PLM4_65_coex_sep16_scaffold_3563_3
GWC2_Nitrospirae_56_14_curated, Nitrospirae, Bacteria

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comp(2647..3561)
DNA (915bp) protein (305aa)
Phosphonate ABC transporter, periplasmic phosphonate-binding protein bin=GWC2_Nitrospirae-rel_56_14 species=Geobacter uraniireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Nitrospirae-rel_56_14 organism_group=Nitrospirae organism_desc=Pretty good; based on recA
phosphonate ABC transporter periplasmic phosphonate-binding protein
Tax=GWC2_Nitrospirae_56_14_curated
PLM4_65_coex_sep16_scaffold_3563_4
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(3605..4807)
DNA (1203bp) protein (401aa)
SAM-dependent methyltransferase {ECO:0000313|EMBL:ABQ25636.1}; EC=2.1.1.- {ECO:0000313|EMBL:ABQ25636.1};; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
SAM-dependent methyltransferase Tax=Geobacter uraniireducens (strain Rf4) RepID=A5G9W5_GEOUR
SAM-dependent methyltransferase-like protein
PLM4_65_coex_sep16_scaffold_3563_5
RBG_19FT_COMBO_Thermodesulfovibrio_42_12_curated, Nitrospirae, Bacteria

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5200..6006
DNA (807bp) protein (269aa)
Response regulator receiver modulated PilZ sensor protein bin=GWC2_CP_Nitrospirae-rel_42_7 species=Geobacter sp. genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_CP_Nitrospirae-rel_42_7 organism_group=Nitrospirae
response regulator receiver modulated PilZ sensor protein
Tax=RBG_19FT_COMBO_Thermodesulfovibrio_42_12_curated
PLM4_65_coex_sep16_scaffold_3563_6
RBG_16_Deltaproteobacteria_49_23_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(6172..8127)
DNA (1956bp) protein (652aa)
Putative uncharacterized protein bin=GWF2_Planctomycetes_42_9 species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GWF2_Planctomycetes_42_9 organism_group=Planctomycetes
hypothetical protein
Tax=RBG_16_Deltaproteobacteria_49_23_curated
PLM4_65_coex_sep16_scaffold_3563_7
Geobacter sp. OR-1, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(8385..9470)
DNA (1086bp) protein (362aa)
Uncharacterized protein {ECO:0000313|EMBL:GAM08747.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter sp. OR-1.;"
hypothetical protein MsalJ2_10743 bin=GWC2_Geobacteraceae_55_20 species=Anaerophaga thermohalophila genus=Anaerophaga taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWC2_Geobacteraceae_55_20 organism_group=Deltaproteobacteria
hypothetical protein
PLM4_65_coex_sep16_scaffold_3563_8
RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated, Betaproteobacteria, Proteobacteria, Bacteria

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comp(9491..10057)
DNA (567bp) protein (189aa)
Isochorismatase hydrolase Tax=Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB) RepID=A0LNV0_SYNFM
isochorismatase hydrolase
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated
PLM4_65_coex_sep16_scaffold_3563_9
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(10079..10282)
DNA (204bp) protein (68aa)
SlyX family protein Tax=Geobacter uraniireducens (strain Rf4) RepID=A5G9W6_GEOUR
SlyX family protein
SlyX family protein {ECO:0000313|EMBL:ABQ25637.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
PLM4_65_coex_sep16_scaffold_3563_10
GWD2_Desulfuromonadales_54_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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10540..11052
DNA (513bp) protein (171aa)
GCN5-related N-acetyltransferase bin=GWD2_Desulfuromonadales_54_10 species=Geobacter uraniireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Desulfuromonadales_54_10 organism_group=Deltaproteobacteria
GNAT family acetyltransferase
Tax=GWD2_Desulfuromonadales_54_10_curated
PLM4_65_coex_sep16_scaffold_3563_11
GWD2_Desulfuromonadales_54_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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11049..11429
DNA (381bp) protein (127aa)
Peptidase M20 bin=GWD2_Desulfuromonadales_54_10 species=Geobacter uraniireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Desulfuromonadales_54_10 organism_group=Deltaproteobacteria
peptidase M20
Tax=GWD2_Desulfuromonadales_54_10_curated
Displaying 11 items

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