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PLM4_65_coex_sep16_scaffold_3776

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_coex_sep16_scaffold_3776_1
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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3..578
DNA (576bp) protein (192aa)
Peptidase M20 Tax=Geobacter uraniireducens (strain Rf4) RepID=A5G9L2_GEOUR
peptidase M20
Peptidase M20 {ECO:0000313|EMBL:ABQ28480.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
PLM4_65_coex_sep16_scaffold_3776_2
GWD1_Spirochaetes_27_9_curated, Spirochaetes, Bacteria

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comp(677..1027)
DNA (351bp) protein (117aa)
PAS domain S-box bin=GWC1_Spirochaetes_27_15 species=Desulfocapsa sulfexigens genus=Desulfocapsa taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC1_Spirochaetes_27_15 organism_group=Spirochaetes
PAS/PAC sensor hybrid histidine kinase
Tax=GWD1_Spirochaetes_27_9_curated
PLM4_65_coex_sep16_scaffold_3776_3
Geobacter soli, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(1246..3003)
DNA (1758bp) protein (586aa)
Uncharacterized protein Tax=Geobacter sulfurreducens (strain DL-1 / KN400) RepID=D7AKW9_GEOSK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KIE41551.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter soli.;"
PLM4_65_coex_sep16_scaffold_3776_4
Pelobacter carbinolicus, Pelobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(3543..3908)
DNA (366bp) protein (122aa)
Antitoxin, XRE family Tax=Pelobacter carbinolicus (strain DSM 2380 / Gra Bd 1) RepID=Q3A3N0_PELCD
antitoxin, XRE family
Antitoxin, XRE family {ECO:0000313|EMBL:ABA89027.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Pelobacteraceae; Pelobacter.;" source="Pelobacter carbinolicus (strain DSM 2380 / Gra Bd 1).;"
PLM4_65_coex_sep16_scaffold_3776_5
Acinetobacter sp. NIPH 1867, Acinetobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4272..5114)
DNA (843bp) protein (281aa)
Uncharacterized protein Tax=Acinetobacter sp. NIPH 1867 RepID=N9RC85_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:ENX55663.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Acinetobacter.;" source="Acinetobacter sp. NIPH 1867.;"
hypothetical protein
PLM4_65_coex_sep16_scaffold_3776_6

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comp(5259..5597)
DNA (339bp) protein (113aa)
Uncharacterized protein Tax=Pelobacter propionicus (strain DSM 2379) RepID=A1AQG3_PELPD
Uncharacterized protein {ECO:0000313|EMBL:KKL81409.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
PLM4_65_coex_sep16_scaffold_3776_7
Pelobacter carbinolicus, Pelobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(5830..6204)
DNA (375bp) protein (125aa)
Antitoxin, XRE family Tax=Pelobacter carbinolicus (strain DSM 2380 / Gra Bd 1) RepID=Q3A3N0_PELCD
antitoxin, XRE family
Antitoxin, XRE family {ECO:0000313|EMBL:ABA89027.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Pelobacteraceae; Pelobacter.;" source="Pelobacter carbinolicus (strain DSM 2380 / Gra Bd 1).;"
PLM4_65_coex_sep16_scaffold_3776_8
Geoalkalibacter ferrihydriticus, Geoalkalibacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(6201..6458)
DNA (258bp) protein (86aa)
Uncharacterized protein {ECO:0000313|EMBL:KIH75500.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geoalkalibacter.;" source="Geoalkalibacter ferrihydriticus DSM 17813.;"
Gp70 bin=GWC2_Geobacteraceae_55_20 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Geobacteraceae_55_20 organism_group=Deltaproteobacteria
toxin, RelE family
PLM4_65_coex_sep16_scaffold_3776_9
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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6710..7468
DNA (759bp) protein (253aa)
Putative uncharacterized protein Tax=Geobacter uraniireducens (strain Rf4) RepID=A5GCU6_GEOUR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABQ24596.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
PLM4_65_coex_sep16_scaffold_3776_10
GWC2_Geobacteraceae_58_44_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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7642..7872
DNA (231bp) protein (77aa)
Putative uncharacterized protein Tax=Thioalkalivibrio thiocyanoxidans ARh 4 RepID=G4DFD9_9GAMM
antitoxin, HicB family
Tax=GWC2_Geobacteraceae_58_44_curated
PLM4_65_coex_sep16_scaffold_3776_11
Geobacter metallireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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7872..8069
DNA (198bp) protein (66aa)
Toxin, HicA family Tax=Geobacter metallireducens RepID=Q39W17_GEOMG
toxin, HicA family
Toxin, HicA family {ECO:0000313|EMBL:ABB31557.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210).;"
PLM4_65_coex_sep16_scaffold_3776_12
RBG_16_Ignavibacteria_35_7_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

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8321..8578
DNA (258bp) protein (86aa)
Putative uncharacterized protein bin=GWF2_Ignavibacteria_35_20 species=Cyclobacterium marinum genus=Cyclobacterium taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWF2_Ignavibacteria_35_20 organism_group=Ignavibacteria
hypothetical protein
Tax=RBG_16_Ignavibacteria_35_7_curated
PLM4_65_coex_sep16_scaffold_3776_13
RIFOXYC2_FULL_Burkholderiales_59_8_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(8622..9089)
DNA (468bp) protein (156aa)
Uncharacterized protein Tax=Pseudomonas sp. CFT9 RepID=S6J569_9PSED
Tax=RIFOXYC2_FULL_Burkholderiales_59_8_curated
Displaying 13 items

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