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PLM4_65_coex_sep16_scaffold_3952

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Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_coex_sep16_scaffold_3952_1
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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3..1520
DNA (1518bp) protein (506aa)
Methyl-accepting chemotaxis sensory transducer Tax=Geobacter uraniireducens (strain Rf4) RepID=A5G5V0_GEOUR
methyl-accepting chemotaxis sensory transducer
Methyl-accepting chemotaxis sensory transducer {ECO:0000313|EMBL:ABQ27168.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
PLM4_65_coex_sep16_scaffold_3952_2
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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1536..1895
DNA (360bp) protein (120aa)
Sulfate transporter/antisigma-factor antagonist STAS Tax=Geobacter uraniireducens (strain Rf4) RepID=A5G5U9_GEOUR
sulfate transporter/antisigma-factor antagonist STAS
Sulfate transporter/antisigma-factor antagonist STAS {ECO:0000313|EMBL:ABQ27167.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
PLM4_65_coex_sep16_scaffold_3952_3
Geobacter daltonii, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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1883..2248
DNA (366bp) protein (122aa)
Response regulator receiver protein Tax=Geobacter daltonii (strain DSM 22248 / JCM 15807 / FRC-32) RepID=B9M9P1_GEODF
response regulator receiver protein
Response receiver CheY associated with MCPs of class 34H {ECO:0000313|EMBL:ACM20613.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter daltonii (strain DSM 22248 / JCM 15807 / FRC-32).;"
PLM4_65_coex_sep16_scaffold_3952_4
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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2245..4362
DNA (2118bp) protein (706aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
CheA signal transduction histidine kinase Tax=Geobacter uraniireducens (strain Rf4) RepID=A5G5U7_GEOUR
CheA signal transduction histidine kinase
PLM4_65_coex_sep16_scaffold_3952_5
Geobacter soli, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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4573..5223
DNA (651bp) protein (217aa)
Helix-turn-helix transcriptional response regulator, LuxR family Tax=Geobacter sulfurreducens (strain ATCC 51573 / DSM 12127 / PCA) RepID=Q74DM3_GEOSL
LuxR family transcriptional regulator {ECO:0000313|EMBL:KIE42687.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter soli.;"
LuxR family transcriptional regulator
PLM4_65_coex_sep16_scaffold_3952_6
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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5571..6191
DNA (621bp) protein (207aa)
CheW protein Tax=Geobacter uraniireducens (strain Rf4) RepID=A5G5U0_GEOUR
putative CheW protein
CheW protein {ECO:0000313|EMBL:ABQ27158.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
PLM4_65_coex_sep16_scaffold_3952_7
Thiocystis violascens, Thiocystis, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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6178..8979
DNA (2802bp) protein (934aa)
Methyl-accepting chemotaxis sensory transducer Tax=Pelobacter propionicus (strain DSM 2379) RepID=A1APE6_PELPD
methyl-accepting chemotaxis sensory transducer
Methyl-accepting chemotaxis protein {ECO:0000313|EMBL:AFL75938.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Thiocystis.;" source="Thiocystis violascens (strain ATCC 17096 / DSM 198 / 6111) (Chromatium; violascens).;"
PLM4_65_coex_sep16_scaffold_3952_8
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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9144..10013
DNA (870bp) protein (290aa)
protein-glutamate O-methyltransferase (EC:2.1.1.80)
Chemotaxis protein methyltransferase {ECO:0000256|PIRNR:PIRNR000410}; EC=2.1.1.80 {ECO:0000256|PIRNR:PIRNR000410};; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
Chemotaxis protein methyltransferase Tax=Geobacter uraniireducens (strain Rf4) RepID=A5G5T8_GEOUR
PLM4_65_coex_sep16_scaffold_3952_9
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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10010..10570
DNA (561bp) protein (187aa)
Probable chemoreceptor glutamine deamidase CheD {ECO:0000256|HAMAP-Rule:MF_01440}; EC=3.5.1.44 {ECO:0000256|HAMAP-Rule:MF_01440};; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
Probable chemoreceptor glutamine deamidase CheD Tax=Geobacter uraniireducens (strain Rf4) RepID=A5G5T7_GEOUR
CheD, stimulates methylation of MCP protein
PLM4_65_coex_sep16_scaffold_3952_10
Geobacter daltonii, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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10624..11718
DNA (1095bp) protein (365aa)
chemotaxis protein CheB (EC:3.1.1.61)
Chemotaxis response regulator protein-glutamate methylesterase {ECO:0000256|HAMAP-Rule:MF_00099}; EC=3.1.1.61 {ECO:0000256|HAMAP-Rule:MF_00099};; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter daltonii (strain DSM 22248 / JCM 15807 / FRC-32).;"
Chemotaxis response regulator protein-glutamate methylesterase Tax=Geobacter daltonii (strain DSM 22248 / JCM 15807 / FRC-32) RepID=B9M9Q2_GEODF
PLM4_65_coex_sep16_scaffold_3952_11
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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11908..13002
DNA (1095bp) protein (365aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
PAS/PAC sensor signal transduction histidine kinase Tax=Geobacter uraniireducens (strain Rf4) RepID=A5G996_GEOUR
PAS/PAC sensor signal transduction histidine kinase
PLM4_65_coex_sep16_scaffold_3952_12
Geobacter metallireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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13215..13577
DNA (363bp) protein (121aa)
Response receiver CheY associated with MCPs of classes 40H and 40+24H Tax=Geobacter metallireducens RepID=Q39QZ1_GEOMG
cheY64H-1; response receiver CheY associated with MCPs of classes 40H and 40+24H
Response receiver CheY associated with MCPs of classes 40H and 40+24H {ECO:0000313|EMBL:ABB33333.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210).;"
PLM4_65_coex_sep16_scaffold_3952_13
Geobacter sp. M18, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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13574..14077
DNA (504bp) protein (168aa)
Inhibitor of MCP methylation CheC-like protein Tax=Geobacter sp. (strain M18) RepID=E8WIK7_GEOS8
inhibitor of MCP methylation CheC-like protein
Inhibitor of MCP methylation CheC-like protein {ECO:0000313|EMBL:ADW15688.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter sp. (strain M18).;"
PLM4_65_coex_sep16_scaffold_3952_14
GWB2_Geobacteraceae_52_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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14144..14497
DNA (354bp) protein (118aa)
Response regulator receiver protein bin=GWD2_Desulfuromonadales_54_10 species=Pelobacter propionicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Desulfuromonadales_54_10 organism_group=Deltaproteobacteria
response regulator receiver protein
Tax=GWB2_Geobacteraceae_52_12_curated
PLM4_65_coex_sep16_scaffold_3952_15
Geobacter pickeringii, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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14685..15104
DNA (420bp) protein (140aa)
Response regulator Tax=Geobacter metallireducens RepID=Q39QZ3_GEOMG
response regulator
Response regulator {ECO:0000313|EMBL:AJE04358.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter pickeringii.;"
PLM4_65_coex_sep16_scaffold_3952_16
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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15398..15820
DNA (423bp) protein (141aa)
Flagellar basal body rod protein FlgB Tax=Geobacter uraniireducens (strain Rf4) RepID=A5G991_GEOUR
flagellar basal-body rod protein FlgB
Flagellar basal body rod protein FlgB {ECO:0000256|PIRNR:PIRNR002889}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
PLM4_65_coex_sep16_scaffold_3952_17
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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15821..16258
DNA (438bp) protein (146aa)
Flagellar basal-body rod protein FlgC Tax=Geobacter uraniireducens (strain Rf4) RepID=A5G990_GEOUR
flagellar basal-body rod protein FlgC
Flagellar basal-body rod protein FlgC {ECO:0000256|RuleBase:RU362062}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
PLM4_65_coex_sep16_scaffold_3952_18
GWC2_Geobacteraceae_55_20_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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16335..16649
DNA (315bp) protein (105aa)
Flagellar hook-basal body complex protein FliE bin=GWD2_Desulfuromonadales_54_10 species=Pelobacter propionicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Desulfuromonadales_54_10 organism_group=Deltaproteobacteria
flagellar hook-basal body protein FliE
Tax=GWC2_Geobacteraceae_55_20_curated
PLM4_65_coex_sep16_scaffold_3952_19
Geobacter metallireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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16742..16963
DNA (222bp) protein (74aa)
Flagellar M-ring protein Tax=Geobacter metallireducens RepID=Q39QZ8_GEOMG
fliF; flagellar M-ring mounting plate protein FliF
Flagellar M-ring protein {ECO:0000256|PIRNR:PIRNR004862}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210).;"
Displaying 19 items

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