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PLM4_65_coex_sep16_scaffold_6797

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_coex_sep16_scaffold_6797_1
GWC2_Geobacteraceae_58_44_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(3..818)
DNA (816bp) protein (272aa)
Outer membrane efflux protein bin=GWB2_Geobacter-like_52_12 species=Geobacter metallireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Geobacter-like_52_12 organism_group=Deltaproteobacteria organism_desc=Good
hypothetical protein
Tax=GWC2_Geobacteraceae_58_44_curated
PLM4_65_coex_sep16_scaffold_6797_2
GWC2_Geobacteraceae_53_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(915..1601)
DNA (687bp) protein (229aa)
Cytochrome c biogenesis protein transmembrane region Tax=Geobacter daltonii (strain DSM 22248 / JCM 15807 / FRC-32) RepID=B9M657_GEODF
cytochrome c biogenesis protein transmembrane region
Tax=GWC2_Geobacteraceae_53_11_curated
PLM4_65_coex_sep16_scaffold_6797_3
GWC2_Geobacteraceae_58_44_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(1598..1981)
DNA (384bp) protein (128aa)
Thioredoxin Tax=Geobacter sp. (strain M18) RepID=E8WNW4_GEOS8
thioredoxin domain-containing protein
Tax=GWC2_Geobacteraceae_58_44_curated
PLM4_65_coex_sep16_scaffold_6797_4
Geobacter sp. OR-1, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(2029..2256)
DNA (228bp) protein (76aa)
Uncharacterized protein {ECO:0000313|EMBL:GAM08338.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter sp. OR-1.;"
Redox-active disulfide protein 2 bin=GWD2_Desulfuromonadales_54_10 species=Geobacter sp. genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Desulfuromonadales_54_10 organism_group=Deltaproteobacteria
redox-active disulfide protein 2
PLM4_65_coex_sep16_scaffold_6797_5
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2315..3262)
DNA (948bp) protein (316aa)
Permease bin=GWC2_Geobacteraceae_55_20 species=Geobacter uraniireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Geobacteraceae_55_20 organism_group=Deltaproteobacteria
permease
Permease {ECO:0000313|EMBL:ABQ24654.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
PLM4_65_coex_sep16_scaffold_6797_6
RBG_13_Deltaproteobacteria_60_28_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(3327..3749)
DNA (423bp) protein (141aa)
OsmC family protein Tax=Syntrophothermus lipocalidus (strain DSM 12680 / TGB-C1) RepID=D7CJH2_SYNLT
OsmC family protein
Tax=RBG_13_Deltaproteobacteria_60_28_curated
PLM4_65_coex_sep16_scaffold_6797_7
RBG_13_Deltaproteobacteria_60_28_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3899..4309)
DNA (411bp) protein (137aa)
DGC domain protein Tax=Syntrophothermus lipocalidus (strain DSM 12680 / TGB-C1) RepID=D7CJH3_SYNLT
DGC domain-containing protein
Tax=RBG_13_Deltaproteobacteria_60_28_curated
PLM4_65_coex_sep16_scaffold_6797_8
RBG_13_Deltaproteobacteria_60_28_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4302..4760)
DNA (459bp) protein (153aa)
DGC domain protein bin=GWC2_Chloroflexi_49_37 species=Syntrophothermus lipocalidus genus=Syntrophothermus taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Chloroflexi_49_37 organism_group=Chloroflexi organism_desc=Good +; Candidate for curation
DGC domain-containing protein
Tax=RBG_13_Deltaproteobacteria_60_28_curated
PLM4_65_coex_sep16_scaffold_6797_9
RBG_13_Deltaproteobacteria_60_28_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4779..5225)
DNA (447bp) protein (149aa)
Glycine cleavage system H protein Tax=Syntrophothermus lipocalidus (strain DSM 12680 / TGB-C1) RepID=D7CJH5_SYNLT
glycine cleavage system protein H
Tax=RBG_13_Deltaproteobacteria_60_28_curated
PLM4_65_coex_sep16_scaffold_6797_10
Pelobacter propionicus, Pelobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5253..5501)
DNA (249bp) protein (83aa)
Uncharacterized protein Tax=Pelobacter propionicus (strain DSM 2379) RepID=A1AM99_PELPD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABK98469.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Pelobacteraceae; Pelobacter.;" source="Pelobacter propionicus (strain DSM 2379).;"
PLM4_65_coex_sep16_scaffold_6797_11
GWB2_Geobacteraceae_52_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5527..5802)
DNA (276bp) protein (92aa)
Uncharacterized protein bin=GWB2_Geobacter-like_52_12 species=Geobacter sp. genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Geobacter-like_52_12 organism_group=Deltaproteobacteria organism_desc=Good
hypothetical protein
Tax=GWB2_Geobacteraceae_52_12_curated
PLM4_65_coex_sep16_scaffold_6797_12
Geobacter sp. OR-1, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5892..6266)
DNA (375bp) protein (125aa)
Arsenical resistance operon trans-acting repressor ArsD Tax=Geobacter uraniireducens (strain Rf4) RepID=A5GA12_GEOUR
Arsenical resistance operon trans-acting repressor ArsD {ECO:0000313|EMBL:GAM09116.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter sp. OR-1.;"
arsenical resistance operon trans-acting repressor ArsD
Displaying 12 items

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