ggKbase home page

PLM4_65_coex_sep16_scaffold_3395_9

Organism: PLM4_65_coex_sep16_Deltaproteobacteria_Geobacteraceae_54_17

near complete RP 50 / 55 MC: 3 BSCG 47 / 51 MC: 2 ASCG 12 / 38 MC: 1
Location: comp(9683..10168)

Top 3 Functional Annotations

Value Algorithm Source
Nucleoside diphosphate-sugar dehydratase, putative Tax=Geobacter sulfurreducens RepID=D7AL62_GEOSK similarity UNIREF
DB: UNIREF100
  • Identity: 75.2
  • Coverage: 157.0
  • Bit_score: 269
  • Evalue 1.80e-69
Putative low-salt glycan biosynthesis epimerase Agl13 {ECO:0000313|EMBL:GAM08171.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter sp. OR-1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 76.7
  • Coverage: 159.0
  • Bit_score: 271
  • Evalue 6.70e-70
dTDP-4-dehydrorhamnose 3,5-epimerase similarity KEGG
DB: KEGG
  • Identity: 77.6
  • Coverage: 156.0
  • Bit_score: 270
  • Evalue 2.30e-70

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Geobacter sp. OR-1 → Geobacter → Desulfuromonadales → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 486
GTGCCGGGAGATAAATTCAAAAAAGGTGCAATCCATGACGTGATAGTCAGGCCTCTCTCCAAGTTTATCGATGAACGGGGATGGCTTGCGGAATTGTTCAGGGAAGATGAAATCGACAAGGGTTTGATGCCGGTAATGGCTTACATTTCCATGACACAGCCAGGGATTGCACGCGGCCCCCATGAACATCTGGATCAGACCGACTGGTTCTGCTTTATCGGGCCGTCCAATTTCAAGGTTTATCTCTGGGACACAAGGAAGGATTCTCCCTCTTGCGGCATAAGACAGGTCATCTTTGCAGGTCTTGACTCTCCCAGGACGGTAATCGTCCCTCCCGGGGTTATCCATGCATACAGGAACATCGGGACGGAAAACGGGATCGTCTTCAATGCTCCAAATCGTCTATATGCGGGAGAAAGCAAGAAATCTCCTGTGGATGAGATCCGTCATGAGGATATCTCCGGTTCACCTTTTCAACTGGATTGA
PROTEIN sequence
Length: 162
VPGDKFKKGAIHDVIVRPLSKFIDERGWLAELFREDEIDKGLMPVMAYISMTQPGIARGPHEHLDQTDWFCFIGPSNFKVYLWDTRKDSPSCGIRQVIFAGLDSPRTVIVPPGVIHAYRNIGTENGIVFNAPNRLYAGESKKSPVDEIRHEDISGSPFQLD*