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PLM4_65_coex_sep16_scaffold_10603

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_coex_sep16_scaffold_10603_1
unknown

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comp(3..104)
DNA (102bp) protein (34aa)

This feature has no annotations

PLM4_65_coex_sep16_scaffold_10603_2
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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comp(101..850)
DNA (750bp) protein (250aa)
hypothetical protein bin=GWA2_Methylomirabilis_73_35 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM4_65_coex_sep16_scaffold_10603_3
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

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949..1680
DNA (732bp) protein (244aa)
tolQ protein; K03562 biopolymer transport protein TolQ bin=bin7_NC10_sister species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
MotA/TolQ/ExbB proton channel
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
PLM4_65_coex_sep16_scaffold_10603_4
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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1670..2098
DNA (429bp) protein (143aa)
tolR; protein TolR; K03560 biopolymer transport protein TolR bin=bin7_NC10_sister species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=bin7_NC10_sister organism_group=NC10
tolR; protein TolR
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM4_65_coex_sep16_scaffold_10603_5
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

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2103..2879
DNA (777bp) protein (259aa)
TonB family protein bin=GWA2_Methylomirabilis_73_35 species=Synechococcus sp. genus=Synechococcus taxon_order=Chroococcales taxon_class=unknown phylum=Cyanobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
putative protein TolA
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
PLM4_65_coex_sep16_scaffold_10603_6
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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2884..4221
DNA (1338bp) protein (446aa)
WD40 domain-containing protein; K03641 TolB protein bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
translocation protein TolB
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM4_65_coex_sep16_scaffold_10603_7
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

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4274..4888
DNA (615bp) protein (205aa)
OmpA/MotB domain protein bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
peptidoglycan-binding outer membrane lipoprotein Pal, OmpA family
Tax=GWC2_Rokubacteria_70_16_curated
PLM4_65_coex_sep16_scaffold_10603_8
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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4840..5850
DNA (1011bp) protein (337aa)
Putative uncharacterized protein bin=GWF2_Methylomirabilis_70_14 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=TA06 tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
tol-pal system protein
Tax=GWA2_Rokubacteria_70_23_curated
PLM4_65_coex_sep16_scaffold_10603_9
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(5851..6339)
DNA (489bp) protein (163aa)
hypothetical protein bin=GWA2_Methylomirabilis_73_35 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM4_65_coex_sep16_scaffold_10603_10
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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6384..6923
DNA (540bp) protein (180aa)
Alpha/beta hydrolase family protein bin=GWA2_Methylomirabilis_73_35 species=Desulfobacca acetoxidans genus=Desulfobacca taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
dienelactone hydrolase
Tax=GWA2_Rokubacteria_73_35_curated
Displaying 10 items

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