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PLM4_65_coex_sep16_scaffold_10949

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_coex_sep16_scaffold_10949_1
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

1..219
DNA (219bp) protein (73aa)
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM4_65_coex_sep16_scaffold_10949_2
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(245..532)
DNA (288bp) protein (96aa)
id=14626173 bin=bin7_NC10_sister tax=bin7_NC10_sister organism_group=NC10
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM4_65_coex_sep16_scaffold_10949_3
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

564..1277
DNA (714bp) protein (238aa)
Uncharacterized protein bin=GWC2_Methylomirabilis_70_16 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM4_65_coex_sep16_scaffold_10949_4
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(1264..2271)
DNA (1008bp) protein (336aa)
hypothetical protein
Peptidase family C39 bin=GWA2_Elusimicrobia_69_24 species=Deinococcus geothermalis genus=Deinococcus taxon_order=Deinococcales taxon_class=Deinococci phylum=Deinococcus-Thermus tax=GWA2_Elusimicrobia_69_24 organism_group=Elusimicrobia
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM4_65_coex_sep16_scaffold_10949_5
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(2640..3554)
DNA (915bp) protein (305aa)
ABC-type transporter, permease component: PepT family bin=GWF2_Methylomirabilis_70_14 species=Alcanivorax dieselolei genus=Alcanivorax taxon_order=Oceanospirillales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Dipeptide transport system permease protein DppC
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM4_65_coex_sep16_scaffold_10949_6
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(3564..4475)
DNA (912bp) protein (304aa)
ABC transporter permease bin=GWC2_Methylomirabilis_70_24 species=Cupriavidus basilensis genus=Cupriavidus taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
dppB3; PepT family ABC transporter permease
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM4_65_coex_sep16_scaffold_10949_7
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(4418..5995)
DNA (1578bp) protein (526aa)
Hemin-binding lipoprotein bin=GWC2_Methylomirabilis_70_24 species=unknown genus=unknown taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
dipeptide ABC transporter substrate-binding protein
Tax=GWA2_Rokubacteria_70_23_curated
PLM4_65_coex_sep16_scaffold_10949_8
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(6179..6589)
DNA (411bp) protein (137aa)
Glutamate-1-semialdehyde 2,1-aminomutase bin=GWC2_Methylomirabilis_70_16 species=alpha proteobacterium BAL199 genus=unknown taxon_order=unknown taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
aminotransferase class-III
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM4_65_coex_sep16_scaffold_10949_9
unknown

Not on your lists

6739..7020
DNA (282bp) protein (94aa)

This feature has no annotations

PLM4_65_coex_sep16_scaffold_10949_10
unknown

Not on your lists

7027..7299
DNA (273bp) protein (91aa)

This feature has no annotations

PLM4_65_coex_sep16_scaffold_10949_11
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(7497..8489)
DNA (993bp) protein (331aa)
alcohol dehydrogenase; K13953 alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1] bin=bin5_DeltaP species=Syntrophobacter fumaroxidans genus=Syntrophobacter taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin5_DeltaP organism_group=Deltaproteobacteria
zinc-binding alcohol dehydrogenase (EC:1.1.1.1)
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
PLM4_65_coex_sep16_scaffold_10949_12
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(8500..9384)
DNA (885bp) protein (295aa)
citrate lyase subunit beta; K01644 citrate lyase subunit beta / citryl-CoA lyase [EC:4.1.3.6 4.1.3.34] bin=bin7_NC10_sister species=Hoeflea phototrophica genus=Hoeflea taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
Citryl-CoA lyase (EC:4.1.3.34)
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM4_65_coex_sep16_scaffold_10949_13
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(9390..9521)
DNA (132bp) protein (44aa)
Acyl dehydratase bin=GWA2_Methylomirabilis_73_35 species=Bacillus bataviensis genus=Bacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
acyl dehydratase
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Displaying 13 items

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