ggKbase home page

PLM4_65_coex_sep16_scaffold_5075

Search features with annotation key words

Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_coex_sep16_scaffold_5075_1
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(1..339)
DNA (339bp) protein (113aa)
Na+/H+ antiporter bin=bin7_NC10_sister species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=bin7_NC10_sister organism_group=NC10
sodium/hydrogen exchanger
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
PLM4_65_coex_sep16_scaffold_5075_2
unknown

Not on your lists

comp(367..702)
DNA (336bp) protein (112aa)

This feature has no annotations

PLM4_65_coex_sep16_scaffold_5075_3
unknown

Not on your lists

comp(736..825)
DNA (90bp) protein (30aa)

This feature has no annotations

PLM4_65_coex_sep16_scaffold_5075_4
unknown

Not on your lists

comp(908..1201)
DNA (294bp) protein (98aa)

This feature has no annotations

PLM4_65_coex_sep16_scaffold_5075_5
unknown

Not on your lists

comp(1222..1677)
DNA (456bp) protein (152aa)

This feature has no annotations

PLM4_65_coex_sep16_scaffold_5075_6
unknown

Not on your lists

comp(1680..1982)
DNA (303bp) protein (101aa)

This feature has no annotations

PLM4_65_coex_sep16_scaffold_5075_7
Anaeromyxobacter sp. Fw109-5, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2050..3924)
DNA (1875bp) protein (625aa)
Na+ symporter Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7HF39_ANADF
Na+ symporter
Na+ symporter {ECO:0000313|EMBL:ABS27335.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.;" source="Anaeromyxobacter sp. (strain Fw109-5).;"
PLM4_65_coex_sep16_scaffold_5075_8
Anaeromyxobacter sp. Fw109-5, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3931..4242)
DNA (312bp) protein (104aa)
Membrane protein-like protein Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7HF38_ANADF
hypothetical protein
Membrane protein-like protein {ECO:0000313|EMBL:ABS27334.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.;" source="Anaeromyxobacter sp. (strain Fw109-5).;"
PLM4_65_coex_sep16_scaffold_5075_9
GWA2_Deltaproteobacteria_65_63_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4498..5907)
DNA (1410bp) protein (470aa)
Two component, sigma54 specific, transcriptional regulator, Fis family bin=GWC2_Deltaproteobacteria_66_88 species=Ammonifex degensii genus=Ammonifex taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Deltaproteobacteria_66_88 organism_group=Deltaproteobacteria
hsfA; DNA-binding response regulator HsfA
Tax=GWA2_Deltaproteobacteria_65_63_curated
PLM4_65_coex_sep16_scaffold_5075_10
GWA2_Deltaproteobacteria_65_63_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5915..8854)
DNA (2940bp) protein (980aa)
PAS sensor protein bin=GWB2_Deltaproteobacteria_65_81 species=Geobacter sp. genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Deltaproteobacteria_65_81 organism_group=Deltaproteobacteria organism_desc=Good +
Stage II sporulation protein E
Tax=GWA2_Deltaproteobacteria_65_63_curated
PLM4_65_coex_sep16_scaffold_5075_11
unknown

Not on your lists

comp(8851..9042)
DNA (192bp) protein (64aa)
hypothetical protein
PLM4_65_coex_sep16_scaffold_5075_12
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(9231..9998)
DNA (768bp) protein (256aa)
hypothetical protein bin=bin7_NC10_sister species=Tepidanaerobacter acetatoxydans genus=Tepidanaerobacter taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM4_65_coex_sep16_scaffold_5075_13
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

10068..11789
DNA (1722bp) protein (574aa)
hypothetical protein; K01652 acetolactate synthase I/II/III large subunit [EC:2.2.1.6] bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Poribacteria tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
Tax=CSP1_6_Rokubacteria
PLM4_65_coex_sep16_scaffold_5075_14
R_Rokubacteria_69_13, Rokubacteria, Bacteria

Not on your lists

11786..12808
DNA (1023bp) protein (341aa)
D-3-phosphoglycerate dehydrogenase (EC:1.1.1.95) bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
D-3-phosphoglycerate dehydrogenase
Tax=RIFCSPHIGHO2_02_FULL_Rokubacteria_69_13_curated
PLM4_65_coex_sep16_scaffold_5075_15
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

12805..13785
DNA (981bp) protein (327aa)
2-amino-3-carboxymuconate-6-semialdehyde decarboxylase bin=GWA2_Methylomirabilis_73_35 species=Mycobacterium xenopi genus=Mycobacterium taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
2-amino-3-carboxymuconate-6-semialdehyde decarboxylase
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Displaying 15 items

View Taxonomy