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PLM4_65_coex_sep16_scaffold_5934

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_coex_sep16_scaffold_5934_1
R_Rokubacteria_71_18, Rokubacteria, Bacteria

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83..1579
DNA (1497bp) protein (499aa)
Protease Do bin=GWA2_Methylomirabilis_73_35 species=Geobacter metallireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
peptidase
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
PLM4_65_coex_sep16_scaffold_5934_2
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

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1576..3018
DNA (1443bp) protein (481aa)
Response regulator bin=GWC2_Methylomirabilis_70_16 species=Pelotomaculum thermopropionicum genus=Pelotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
two component, sigma54 specific, transcriptional regulator, Fis family
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
PLM4_65_coex_sep16_scaffold_5934_3
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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comp(3032..3697)
DNA (666bp) protein (222aa)
Putative uncharacterized protein bin=GWA2_Methylomirabilis_73_35 species=Rubrobacter xylanophilus genus=Rubrobacter taxon_order=Rubrobacterales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM4_65_coex_sep16_scaffold_5934_4
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(3849..4478)
DNA (630bp) protein (210aa)
pmtA; phosphatidylethanolamine N-methyltransferase (EC:2.1.1.17)
Similar to phosphatidylethanolamine N-methyltransferase bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
PLM4_65_coex_sep16_scaffold_5934_5
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(4588..5934)
DNA (1347bp) protein (449aa)
magnesium transporter; K06213 magnesium transporter bin=bin7_NC10_sister species=Herpetosiphon aurantiacus genus=Herpetosiphon taxon_order=Herpetosiphonales taxon_class=Chloroflexi phylum=Chloroflexi tax=bin7_NC10_sister organism_group=NC10
Mg/Co/Ni transporter
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
PLM4_65_coex_sep16_scaffold_5934_6
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

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comp(5938..7308)
DNA (1371bp) protein (457aa)
Phosphoesterase RecJ domain protein bin=GWC2_Methylomirabilis_70_16 species=Desulfococcus oleovorans genus=Desulfococcus taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
hypothetical protein
Tax=GWC2_Rokubacteria_70_16_curated
PLM4_65_coex_sep16_scaffold_5934_7
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(7353..8840)
DNA (1488bp) protein (496aa)
aspartate ammonia-lyase (EC:4.2.1.2)
Fumarate hydratase class II bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM4_65_coex_sep16_scaffold_5934_8
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(8848..10464)
DNA (1617bp) protein (539aa)
Alpha,alpha-trehalose-phosphate synthase (UDP-forming) bin=GWF2_Methylomirabilis_70_14 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
alpha,alpha-trehalose-phosphate synthase
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Displaying 8 items

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