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PLM4_65_coex_sep16_scaffold_16718

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_coex_sep16_scaffold_16718_1
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

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comp(3..659)
DNA (657bp) protein (219aa)
TPR repeat-containing protein bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Cyanothece taxon_order=Chroococcales taxon_class=unknown phylum=Cyanobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
PLM4_65_coex_sep16_scaffold_16718_2
R_Rokubacteria_71_18, Rokubacteria, Bacteria

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comp(728..1120)
DNA (393bp) protein (131aa)
cetoacetate metabolism regulatory protein atoC bin=GWA2_Methylomirabilis_73_35 species=Gemmata obscuriglobus genus=Gemmata taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Fis family two component sigma-54 specific transcriptional regulator
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
PLM4_65_coex_sep16_scaffold_16718_3
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(1165..2118)
DNA (954bp) protein (318aa)
ABC transporter ATPase (EC:3.6.3.-)
ABC-type transport system, ATPase component Tax=Candidatus Nitrospira defluvii RepID=D8PIN4_9BACT
ABC-type multidrug transport system, ATPase component {ECO:0000313|EMBL:CDM65566.1}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
PLM4_65_coex_sep16_scaffold_16718_4
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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comp(2115..3053)
DNA (939bp) protein (313aa)
Putative uncharacterized protein Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LE30_CHLTF
Uncharacterized protein {ECO:0000313|EMBL:CDM65567.1}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
hypothetical protein
PLM4_65_coex_sep16_scaffold_16718_5
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

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comp(3061..3849)
DNA (789bp) protein (263aa)
Putative uncharacterized protein Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LE31_CHLTF
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
PLM4_65_coex_sep16_scaffold_16718_6
R_Rokubacteria_71_18, Rokubacteria, Bacteria

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comp(3861..4229)
DNA (369bp) protein (123aa)
Two component, sigma54 specific, transcriptional regulator, Fis family bin=GWC2_Methylomirabilis_70_24 species=Actinomyces sp. oral taxon 181 genus=Actinomyces taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
PLM4_65_coex_sep16_scaffold_16718_7
Streptomyces rimosus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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4246..5586
DNA (1341bp) protein (447aa)
multidrug-efflux transporter bin=CNBR_ACIDO species=Streptomyces aurantiacus genus=Streptomyces taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
Uncharacterized protein {ECO:0000313|EMBL:ELQ80612.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces rimosus subsp. rimosus ATCC 10970.;"
multidrug-efflux transporter
PLM4_65_coex_sep16_scaffold_16718_8
unknown

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5583..5864
DNA (282bp) protein (94aa)

This feature has no annotations

Displaying 8 items

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