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PLM4_65_coex_sep16_scaffold_27604

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Displaying 7 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_coex_sep16_scaffold_27604_1
R_Rokubacteria_68_19, Rokubacteria, Bacteria

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comp(3..113)
DNA (111bp) protein (37aa)
Transcriptional regulator, Rrf2 family bin=GWA2_Methylomirabilis_73_35 species=Pseudoflavonifractor capillosus genus=Pseudoflavonifractor taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
PLM4_65_coex_sep16_scaffold_27604_2
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(124..279)
DNA (156bp) protein (52aa)
Porphobilinogen synthase (EC:4.2.1.24)
Delta-aminolevulinic acid dehydratase bin=GWC2_Methylomirabilis_70_16 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Tax=GWC2_Rokubacteria_70_16_curated
PLM4_65_coex_sep16_scaffold_27604_3
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(286..798)
DNA (513bp) protein (171aa)
hemB; Delta-aminolevulinic acid dehydratase (porphobilinogen synthase) (EC:4.2.1.24)
Delta-aminolevulinic acid dehydratase bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM4_65_coex_sep16_scaffold_27604_4
unknown

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900..1016
DNA (117bp) protein (39aa)

This feature has no annotations

PLM4_65_coex_sep16_scaffold_27604_5
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(1111..1950)
DNA (840bp) protein (280aa)
uroporphyrinogen-III C-methyltransferase/uroporphyrinogen-III synthase (EC:2.1.1.107 4.2.1.75)
Uroporphyrin-III C-methyltransferase bin=GWA2_Methylomirabilis_73_35 species=Thermodesulfatator indicus genus=Thermodesulfatator taxon_order=Thermodesulfobacteriales taxon_class=Thermodesulfobacteria phylum=Thermodesulfobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM4_65_coex_sep16_scaffold_27604_6
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(2069..2989)
DNA (921bp) protein (307aa)
Porphobilinogen deaminase bin=GWA2_Methylomirabilis_73_35 species=Pelobacter carbinolicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Porphobilinogen deaminase
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM4_65_coex_sep16_scaffold_27604_7
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(2986..3546)
DNA (561bp) protein (187aa)
Glutamyl-tRNA reductase bin=GWA2_Methylomirabilis_73_35 species=Pelobacter carbinolicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
glutamyl-tRNA reductase
Tax=GWA2_Rokubacteria_73_35_curated
Displaying 7 items

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