ggKbase home page

PLM4_65_coex_sep16_scaffold_2075_12

Organism: PLM4_65_coex_sep16_Rokubacteria_70_16

near complete RP 42 / 55 MC: 5 BSCG 42 / 51 MC: 2 ASCG 8 / 38
Location: 8788..9270

Top 3 Functional Annotations

Value Algorithm Source
3-dehydroquinate dehydratase (EC:4.2.1.10) similarity KEGG
DB: KEGG
  • Identity: 64.9
  • Coverage: 148.0
  • Bit_score: 185
  • Evalue 9.60e-45
3-dehydroquinate dehydratase bin=GWA2_Methylomirabilis_73_35 species=Desulfotomaculum hydrothermale genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis similarity UNIREF
DB: UNIREF100
  • Identity: 76.5
  • Coverage: 149.0
  • Bit_score: 231
  • Evalue 3.20e-58
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 79.2
  • Coverage: 149.0
  • Bit_score: 239
  • Evalue 2.10e-60

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RLO_Rokubacteria_71_22 → Rokubacteria → Bacteria

Sequences

DNA sequence
Length: 483
ATGCCTGTCCGCGCCGCGCTCGTCCTCCACGGCCCAAACCTGAACCTGCTCGGCACGCGCGAGCCGGGGGTGTACGGGCGGGTCACGCTGGGCGAGGTCGACCGGCTGCTCCGCGAGCACGGGCGGCGGCGGGGCCTGCGCGTCGAGTGCCGGCAGTCGAACCTGGAGGGGGAGCTGATCGGCTGGCTGCAGACCGCGCGGCGCGACGGCTTCTCGGGCGTCGTCCTGAACCCGGGCGCCTTCACCCACTACTCCATCGCGCTGCGCGACGCCGTGTCGGCCATCGACGTACCGGTCGTCGAGGTCCACCTGTCGAACATCCACGGCCGGGAGGAGTTCCGCCGGCACTCGGTCATCGCCGCCGTCGCGCGCGGGCAGATCGCGGGCTTCGGCCCGCACAGCTACGTCCTCGGCCTCGAGGCCCTGCTCGCCCTCGACCTCGGCCGTCCCCGAGTGAATCAGCGCCGTCGTCCCCGCGTCTAA
PROTEIN sequence
Length: 161
MPVRAALVLHGPNLNLLGTREPGVYGRVTLGEVDRLLREHGRRRGLRVECRQSNLEGELIGWLQTARRDGFSGVVLNPGAFTHYSIALRDAVSAIDVPVVEVHLSNIHGREEFRRHSVIAAVARGQIAGFGPHSYVLGLEALLALDLGRPRVNQRRRPRV*