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PLM4_65_coex_sep16_scaffold_5654_1

Organism: PLM4_65_coex_sep16_Rokubacteria_70_16

near complete RP 42 / 55 MC: 5 BSCG 42 / 51 MC: 2 ASCG 8 / 38
Location: comp(2..343)

Top 3 Functional Annotations

Value Algorithm Source
30S ribosomal protein S1; K02945 small subunit ribosomal protein S1 bin=CNBR_ACIDO species=Geobacter bemidjiensis genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1? similarity UNIREF
DB: UNIREF100
  • Identity: 43.6
  • Coverage: 117.0
  • Bit_score: 92
  • Evalue 1.60e-16
30S ribosomal protein S1 similarity KEGG
DB: KEGG
  • Identity: 39.8
  • Coverage: 113.0
  • Bit_score: 83
  • Evalue 2.80e-14
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 68.8
  • Coverage: 109.0
  • Bit_score: 153
  • Evalue 1.10e-34

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Taxonomy

RLO_Rokubacteria_71_22 → Rokubacteria → Bacteria

Sequences

DNA sequence
Length: 342
ATGAGTGACTCCGAAGACGACTTCGCGACGCTGTTCGCTCGCCACCAGGCCGGACCGGGGCTGGAGCGAGGCCAGGTCGTCAAGGGACGCATCATCCAGATCAGGGGCGAGCACGTGTTCGTCGACGTCGGCGGCAAGGGCGAGGCCTGGATCGACCGCGGCGAGCTGACCGACGACGAGGGGCGGCTGCGCGTGGCCGTGGGCGACGAGGTCGAGGCCACGGTCGTCTCGACGGGCGACGAGGTGCGGCTCTCGCACAAGCTCCGCCAGGGCGCCCAGGCGCGCGAGGCGGTGGAGATGGCGGCGCAGAGCGGCATCCCGGTCGAGGGCAAGGTGGCGGCG
PROTEIN sequence
Length: 114
MSDSEDDFATLFARHQAGPGLERGQVVKGRIIQIRGEHVFVDVGGKGEAWIDRGELTDDEGRLRVAVGDEVEATVVSTGDEVRLSHKLRQGAQAREAVEMAAQSGIPVEGKVAA