ggKbase home page

PLM4_65_coex_sep16_scaffold_14688_15

Organism: PLM4_65_coex_sep16_Rokubacteria_70_16

near complete RP 42 / 55 MC: 5 BSCG 42 / 51 MC: 2 ASCG 8 / 38
Location: 6519..7499

Top 3 Functional Annotations

Value Algorithm Source
rpoA; DNA-directed RNA polymerase subunit alpha (EC:2.7.7.6) similarity KEGG
DB: KEGG
  • Identity: 45.5
  • Coverage: 310.0
  • Bit_score: 255
  • Evalue 2.00e-65
DNA-directed RNA polymerase subunit alpha bin=GWA2_Methylomirabilis_73_35 species=Moorella thermoacetica genus=Moorella taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis similarity UNIREF
DB: UNIREF100
  • Identity: 73.9
  • Coverage: 326.0
  • Bit_score: 485
  • Evalue 4.20e-134
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 78.6
  • Coverage: 323.0
  • Bit_score: 507
  • Evalue 1.10e-140

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

R_Rokubacteria_71_18 → Rokubacteria → Bacteria

Sequences

DNA sequence
Length: 981
ATGCCACGCATTCCGTTCCAGAAGCCGAAGAAGGTCGAGTGGGAGATTCTCAGCGACCGCTACGGCCGGCTGGTGGCCGAGCCGTTCGAAAAGGGCTACGCGCTCACCGTCGGCAACTCGCTGCGGCGCACGCTGCTGTCCATCGTGCCGGGCGCGGCGGTGGCCTGGGTGAAGATCGAGGGCGTCCGGCCCAACGACACCCGGATCGCCGGCGTCACCGAGAGCCTCACCGACGTGCTGCTGAATCTCAAGAAGCTGGCGATCCAGGTGCCCTCGGACGAGCCGCGGGTGCTGCGCCTGGAGGCGACCGGTCCCAAAGAGGTCAAGGGCGAGGACGTGCCGGAGACGGGCGCCGAGATCCTCAACCCCGAGACCCATCTCTTCACGCTGGAGGCCGGCGCCCGGGTGACGCTGGAGCTCGGCGTGGGTGTGGGCCGTCGCTACCAGGCGGCCAATCAGCCTGGCGGCAGCACCCCGGCCGGCGCCCTGTCCCTCGACGCGGCATACTCGCCGATCACGCGGGTGTCCTACAACGTCGAGATGTCGCGCCTGGGCAAGATCACCGACTACGAGAAGCTCGTGCTCGAGGTGTGGACGAACGGCGCCATCAGCCCGGACGACGCGTTGACCCGGGCCTCCACCTTCCTGCGCGACCACTACGCGCCCCTGGCGCCGGCCGGTACCGACGAGGACGAGGAGGCGGAGGCGACCGCCGGCGAGGCCTTCCTGCGAGACGCCCTCGCCAAGACGCTGGAGGAGCTGGCGCTGCCGGCGCGGGCCATCAACGCGCTCAAGGGCGCCGAGCTGCACCTGGTCGTCGACCTCGTGCAGAAGACCGAGCTCGACCTGGCCGACGTCAAGAACCTCGGCGACAAGTCGATCGACGAGATCAAGACCGCGCTGGCCGCGCTCGGCCTATCGCTCGGCATGCGCATCGACCCCAACGTGCTGGGGGCGCTTGGGCGTGGTCTTGCGAAGTGA
PROTEIN sequence
Length: 327
MPRIPFQKPKKVEWEILSDRYGRLVAEPFEKGYALTVGNSLRRTLLSIVPGAAVAWVKIEGVRPNDTRIAGVTESLTDVLLNLKKLAIQVPSDEPRVLRLEATGPKEVKGEDVPETGAEILNPETHLFTLEAGARVTLELGVGVGRRYQAANQPGGSTPAGALSLDAAYSPITRVSYNVEMSRLGKITDYEKLVLEVWTNGAISPDDALTRASTFLRDHYAPLAPAGTDEDEEAEATAGEAFLRDALAKTLEELALPARAINALKGAELHLVVDLVQKTELDLADVKNLGDKSIDEIKTALAALGLSLGMRIDPNVLGALGRGLAK*